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A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.
Protein expressioni
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM: 234.5
Min nTPM: 71.3
Std nTPM: 25.3
Median nTPM:
308_1
70 years, female
234.5
491_1
89 years, female
190.4
495_1
57 years, female
183.1
307_1
66 years, female
172.9
322_1
76 years, male
155.6
2_1
77 years, female
150.6
447_1
81 years, male
146.0
348_1
84 years, male
144.7
315_1
62 years, female
140.5
119_1
70 years, female
140.0
41_1
94 years, female
138.6
6_1
73 years, female
134.5
311_1
78 years, male
134.4
142_1
61 years, female
133.7
218_1
71 years, female
132.4
317_1
60 years, male
131.2
414_1
84 years, female
129.8
162_1
79 years, female
129.3
42_1
85 years, male
129.1
145_1
84 years, male
129.1
173_1
67 years, male
127.4
490_1
67 years, female
127.3
139_1
64 years, female
126.0
350_1
84 years, female
125.9
149_1
88 years, male
123.5
117_1
61 years, male
123.1
314_1
67 years, male
121.8
466_1
57 years, female
119.6
81_1
67 years, male
119.5
415_1
77 years, female
119.2
32_1
67 years, male
118.8
43_1
64 years, female
118.3
89_1
63 years, male
117.5
115_1
83 years, male
116.4
313_1
79 years, female
116.3
35_1
74 years, female
115.5
153_1
70 years, female
115.0
109_1
81 years, female
114.7
501_1
88 years, male
114.3
468_1
89 years, male
114.1
120_1
70 years, female
112.2
265_1
87 years, male
112.0
126_1
63 years, male
110.2
324_1
76 years, male
109.1
518_1
75 years, female
108.7
217_1
76 years, male
108.3
17_1
71 years, male
107.3
137_1
83 years, male
107.3
347_1
72 years, male
107.2
237_1
82 years, male
106.5
172_1
72 years, female
104.8
375_1
74 years, female
104.2
389_1
86 years, female
104.0
413_1
59 years, female
103.9
18_1
88 years, male
103.7
99_1
64 years, male
102.2
254_1
77 years, female
102.2
286_1
68 years, female
102.2
379_1
60 years, male
102.1
349_1
83 years, male
101.7
355_1
70 years, female
101.6
4_1
88 years, female
101.3
266_1
85 years, male
101.1
288_1
66 years, female
100.7
163_1
78 years, male
100.4
353_1
82 years, female
100.3
295_1
61 years, female
99.3
9_1
66 years, female
99.0
526_1
61 years, male
98.6
229_1
69 years, female
98.5
291_1
76 years, male
98.4
499_1
55 years, female
98.2
386_1
76 years, male
97.1
396_1
62 years, male
96.7
321_1
62 years, female
96.0
503_1
68 years, male
95.4
384_1
83 years, male
95.1
335_1
73 years, female
94.8
316_1
62 years, male
93.5
351_1
91 years, male
92.0
177_1
74 years, male
91.9
425_1
59 years, female
91.8
506_1
65 years, male
91.2
354_1
81 years, female
91.1
320_1
89 years, female
91.0
452_1
88 years, female
91.0
243_1
75 years, male
89.9
318_1
68 years, male
88.6
405_1
91 years, male
87.7
264_1
73 years, female
87.5
377_1
82 years, female
86.3
394_1
75 years, female
85.6
480_1
63 years, male
84.7
246_1
77 years, male
84.5
376_1
75 years, female
84.4
406_1
79 years, male
84.3
517_1
88 years, male
82.8
319_1
81 years, male
81.8
404_1
82 years, female
81.5
352_1
62 years, male
80.9
292_1
71 years, male
77.9
356_1
87 years, female
76.4
293_1
68 years, female
73.1
189_1
76 years, male
72.4
251_1
78 years, male
71.3
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
