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ATP5F1D
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  • ATP5F1D
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:205.8 nTPM
FANTOM5:268.2 Scaled Tags Per Million
Pig:232.6 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA002865
Glial cells Not detected
Neuronal cells Medium



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 205.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 205.8
Samples: 246

Max nTPM: 477.6
Min nTPM: 77.2
Std nTPM: 66.1
Median nTPM: 192.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 477.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 415.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 410.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 403.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 397.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 374.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 374.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 356.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 352.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 345.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 342.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 319.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 314.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 313.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 312.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 311.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 303.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 302.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 300.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 300.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 298.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 293.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 292.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 289.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 289.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 288.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 288.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 285.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 285.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 285.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 280.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 276.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 276.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 275.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 273.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 272.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 267.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 267.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 266.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 265.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 264.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 264.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 262.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 261.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 260.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 260.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 259.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 259.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 259.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 258.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 257.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 256.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 250.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 250.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 246.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 245.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 245.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 244.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 244.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 244.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 243.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 241.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 241.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 241.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 240.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 240.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 239.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 237.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 237.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 236.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 236.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 236.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 236.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 235.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 235.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 232.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 232.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 231.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 230.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 230.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 229.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 228.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 227.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 226.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 226.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 224.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 224.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 224.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 223.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 220.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 218.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 217.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 216.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 215.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 214.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 213.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 213.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 212.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 211.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 210.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 205.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 203.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 203.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 202.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 202.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 200.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 200.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 199.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 199.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 199.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 199.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 198.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 198.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 197.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 197.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 197.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 196.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 196.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 195.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 194.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 194.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 192.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 192.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 192.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 191.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 191.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 191.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 191.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 191.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 190.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 190.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 190.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 189.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 188.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 188.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 187.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 187.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 186.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 186.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 185.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 185.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 184.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 184.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 184.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 183.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 183.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 182.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 182.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 181.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 181.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 181.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 181.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 180.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 180.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 180.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 180.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 180.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 179.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 179.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 179.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 178.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 177.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 176.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 175.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 174.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 173.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 173.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 173.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 173.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 172.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 172.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 172.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 170.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 170.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 170.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 169.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 169.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 168.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 168.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 166.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 166.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 166.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 165.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 165.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 164.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 163.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 162.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 162.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 162.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 160.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 159.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 158.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 158.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 157.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 157.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 156.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 156.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 155.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 155.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 154.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 154.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 153.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 152.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 151.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 151.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 150.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 150.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 147.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 146.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 144.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 142.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 141.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 141.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 140.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 140.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 140.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 136.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 134.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 131.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 131.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 126.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 126.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 124.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 124.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 123.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 122.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 121.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 120.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 118.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 116.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 111.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 111.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 109.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 109.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 105.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 105.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 101.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 99.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 95.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 94.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 91.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 89.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 84.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 83.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 82.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 77.2
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 268.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 268.2
FF:10164-103B2 76 years, female 268.2

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 232.6
Pig sample Sample description nTPM
Caudate
nTPM: 232.7
Samples: 4

Max nTPM: 276.9
Min nTPM: 188.0
Sample A Female 188.0
Sample B Female 259.1
Sample C Male 276.9
Sample D Male 206.6

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