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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:223.2 nTPM
FANTOM5:160.6 Scaled Tags Per Million
Pig:93.0 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA041713Antibody HPA049578
Glial cells LowNot detected
Neuronal cells MediumNot detected




CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 223.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 223.2
Samples: 246

Max nTPM: 405.9
Min nTPM: 76.0
Std nTPM: 55.0
Median nTPM: 220.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 405.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 397.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 393.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 391.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 374.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 361.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 352.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 351.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 327.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 322.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 320.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 318.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 316.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 314.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 313.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 306.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 306.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 305.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 305.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 302.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 301.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 301.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 300.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 298.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 297.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 297.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 296.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 287.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 285.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 283.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 283.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 281.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 281.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 279.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 279.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 278.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 277.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 276.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 276.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 274.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 273.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 273.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 271.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 269.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 269.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 268.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 268.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 267.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 267.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 264.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 262.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 259.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 259.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 258.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 255.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 255.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 255.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 255.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 254.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 253.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 252.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 251.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 251.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 250.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 249.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 248.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 248.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 248.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 247.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 247.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 247.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 246.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 246.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 246.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 246.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 244.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 244.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 244.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 243.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 242.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 241.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 241.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 240.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 240.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 238.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 237.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 236.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 235.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 235.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 235.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 235.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 234.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 234.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 234.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 233.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 233.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 233.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 232.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 232.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 231.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 230.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 229.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 229.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 229.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 228.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 228.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 228.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 228.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 227.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 227.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 227.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 225.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 224.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 224.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 223.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 223.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 223.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 223.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 222.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 222.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 221.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 221.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 220.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 219.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 219.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 219.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 217.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 217.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 217.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 217.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 214.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 214.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 214.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 212.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 211.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 211.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 210.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 209.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 209.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 208.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 208.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 207.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 207.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 206.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 206.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 206.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 206.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 205.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 205.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 205.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 204.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 203.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 203.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 203.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 203.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 203.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 202.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 202.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 202.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 200.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 199.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 199.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 198.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 198.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 198.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 198.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 197.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 195.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 195.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 195.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 193.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 193.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 193.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 193.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 191.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 191.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 190.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 190.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 188.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 188.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 188.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 187.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 187.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 186.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 184.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 184.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 184.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 184.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 183.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 182.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 182.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 182.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 181.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 180.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 180.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 179.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 179.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 178.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 178.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 177.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 177.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 176.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 176.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 174.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 173.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 172.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 172.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 171.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 171.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 170.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 170.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 168.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 167.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 167.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 167.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 166.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 165.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 164.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 164.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 162.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 162.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 161.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 161.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 160.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 160.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 158.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 158.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 155.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 152.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 151.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 149.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 147.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 142.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 137.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 136.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 134.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 133.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 131.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 130.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 127.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 120.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 115.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 111.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 101.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 92.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 76.0
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 160.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 160.6
FF:10164-103B2 76 years, female 160.6

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 93.0
Pig sample Sample description nTPM
Caudate
nTPM: 93.0
Samples: 4

Max nTPM: 123.2
Min nTPM: 68.8
Sample A Female 68.8
Sample B Female 94.4
Sample C Male 123.2
Sample D Male 85.5

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