HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:39.7 nTPM
HPA:39.7 nTPM
GTEx:57.8 nTPM
FANTOM5:49.6 Scaled Tags Per Million
Pig:52.3 nTPM
Mouse:89.6 nTPM
Allen mouse:7.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA065931
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 39.7
Sample id Sample description nTPM
Hippocampus
nTPM: 33.9
1898 Male, age 80, left hemisphere 37.1
2621 Female, age 67, right hemisphere 35.5
1855 Male, age 76, left hemisphere 33.8
2148 Female, age 91, left hemisphere 32.9
2529 Female, age 94, left hemisphere 32.5
1911 Female, age 85, right hemisphere 31.7
Dentate gyrus
nTPM: 34.9
2530 Female, age 94, left hemisphere 38.6
2528 Male, age 74, both hemispheres 35.6
2246 Female, age 85, both hemispheres 34.5
1927 Female, age 91, both hemispheres 34.1
2010 Male, age 76, both hemispheres 33.9
2531 Female, age 67, both hemispheres 32.8
Entorhinal gyrus
nTPM: 35.4
2117 Female, age 91, right hemisphere 37.6
2764 Male, age 80, right hemisphere 37.5
1938 Female, age 85, left hemisphere 36.4
1787 Male, age 76, left hemisphere 35.7
2613 Female, age 94, left hemisphere 32.8
2686 Male, age 75, right hemisphere 32.5
Hippocampus, CA1
nTPM: 36.3
2749 Male, age 80, left hemisphere 43.6
2527 Male, age 74, both hemispheres 38.7
1873 Female, age 85, both hemispheres 34.4
2082 Female, age 91, right hemisphere 32.9
2045 Male, age 76, both hemispheres 31.7
Hippocampus, CA2
nTPM: 36.2
1963 Male, age 80, left hemisphere 38.9
1892 Male, age 76, both hemispheres 37.7
2437 Female, age 94, left hemisphere 36.9
2249 Male, age 74, both hemispheres 36.6
1940 Female, age 85, left hemisphere 34.5
2113 Female, age 91, right hemisphere 32.3
Hippocampus, CA3
nTPM: 34.2
2137 Male, age 80, left hemisphere 36.1
2436 Male, age 74, both hemispheres 36.0
1867 Male, age 76, both hemispheres 35.4
1891 Female, age 85, both hemispheres 34.5
2861 Female, age 67, both hemispheres 32.0
2620 Female, age 94, left hemisphere 31.3
Parahippocampal cortex
nTPM: 35.5
1850 Male, age 80, both hemispheres 38.3
2532 Female, age 72, left hemisphere 38.2
1933 Female, age 85, both hemispheres 38.0
1990 Female, age 91, right hemisphere 35.9
2250 Female, age 67, right hemisphere 35.7
2245 Female, age 91, both hemispheres 35.0
2692 Male, age 74, both hemispheres 34.8
2018 Male, age 76, both hemispheres 33.8
2693 Female, age 94, both hemispheres 33.3
2622 Female, age 67, right hemisphere 31.6
Perirhinal gyrus
nTPM: 39.7
1794 Male, age 80, right hemisphere 42.8
1847 Female, age 91, left hemisphere 41.0
1841 Female, age 85, right hemisphere 40.0
2521 Female, age 94, right hemisphere 38.2
2848 Male, age 76, right hemisphere 36.4
Subiculum
nTPM: 37.0
2438 Female, age 94, left hemisphere 39.9
1977 Female, age 85, both hemispheres 39.7
1901 Male, age 80, both hemispheres 38.8
2619 Male, age 74, both hemispheres 38.1
2042 Male, age 76, both hemispheres 32.6
2729 Female, age 91, right hemisphere 32.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 57.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 57.8
Samples: 197

Max nTPM: 132.7
Min nTPM: 24.4
Std nTPM: 13.7
Median nTPM: 56.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 132.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 92.7
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 90.0
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 86.2
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 86.0
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 83.2
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 81.9
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 80.6
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 78.5
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 78.4
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 78.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 49.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 49.6
FF:10153-102I9 76 years, female 51.1
FF:10169-103B7 60 years, female 48.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 52.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 52.3
Samples: 4

Max nTPM: 67.4
Min nTPM: 37.8
Sample A Female 67.4
Sample B Female 50.2
Sample C Male 53.9
Sample D Male 37.8
Entorhinal cortex
nTPM: 45.7
Samples: 4

Max nTPM: 48.8
Min nTPM: 38.7
Sample A Female 47.2
Sample B Female 48.8
Sample C Male 47.9
Sample D Male 38.7
Subiculum
nTPM: 46.2
Samples: 4

Max nTPM: 61.5
Min nTPM: 40.7
Sample A Female 61.5
Sample B Female 40.7
Sample C Male 41.0
Sample D Male 41.7
Ventral hippocampus
nTPM: 48.0
Samples: 4

Max nTPM: 58.5
Min nTPM: 38.5
Sample A Female 58.5
Sample B Female 38.5
Sample C Male 51.1
Sample D Male 44.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 89.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 89.7
Samples: 4

Max nTPM: 93.4
Min nTPM: 84.2
Sample A Male 84.2
Sample B Male 93.4
Sample C Female 92.4
Sample D Female 88.6
Hippocampal formation
nTPM: 81.9
Samples: 4

Max nTPM: 94.5
Min nTPM: 76.9
Sample A Male 94.5
Sample B Male 78.0
Sample C Female 76.9
Sample D Female 78.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.2
69174298 Antisense, RP_050329_02_B03, Mouse strain C57BL/6J (56 days, male) 7.2

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