HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:22.9 nTPM
HPA:22.9 nTPM
GTEx:20.8 nTPM
FANTOM5:9.2 Scaled Tags Per Million
Mouse:99.8 nTPM
Allen mouse:9.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 22.9
Sample id Sample description nTPM
Hippocampus
nTPM: 21.4
2148 Female, age 91, left hemisphere 22.1
2621 Female, age 67, right hemisphere 21.5
1855 Male, age 76, left hemisphere 21.4
1898 Male, age 80, left hemisphere 21.4
2529 Female, age 94, left hemisphere 21.0
1911 Female, age 85, right hemisphere 20.8
Dentate gyrus
nTPM: 21.3
2531 Female, age 67, both hemispheres 24.3
1927 Female, age 91, both hemispheres 23.5
2528 Male, age 74, both hemispheres 22.8
2246 Female, age 85, both hemispheres 20.2
2010 Male, age 76, both hemispheres 18.9
2530 Female, age 94, left hemisphere 18.3
Entorhinal gyrus
nTPM: 22.5
2613 Female, age 94, left hemisphere 25.8
2764 Male, age 80, right hemisphere 25.0
1787 Male, age 76, left hemisphere 23.3
2686 Male, age 75, right hemisphere 23.0
1938 Female, age 85, left hemisphere 20.3
2117 Female, age 91, right hemisphere 17.7
Hippocampus, CA1
nTPM: 21.6
1873 Female, age 85, both hemispheres 22.6
2749 Male, age 80, left hemisphere 22.0
2045 Male, age 76, both hemispheres 21.9
2527 Male, age 74, both hemispheres 21.5
2082 Female, age 91, right hemisphere 20.0
Hippocampus, CA2
nTPM: 20.9
1963 Male, age 80, left hemisphere 23.8
2113 Female, age 91, right hemisphere 22.0
1892 Male, age 76, both hemispheres 21.0
2437 Female, age 94, left hemisphere 21.0
1940 Female, age 85, left hemisphere 19.7
2249 Male, age 74, both hemispheres 18.2
Hippocampus, CA3
nTPM: 21.2
2620 Female, age 94, left hemisphere 25.6
2861 Female, age 67, both hemispheres 22.9
2137 Male, age 80, left hemisphere 21.7
1891 Female, age 85, both hemispheres 20.7
2436 Male, age 74, both hemispheres 19.1
1867 Male, age 76, both hemispheres 17.2
Parahippocampal cortex
nTPM: 22.9
2693 Female, age 94, both hemispheres 27.1
2692 Male, age 74, both hemispheres 25.2
1990 Female, age 91, right hemisphere 23.9
2622 Female, age 67, right hemisphere 22.9
1933 Female, age 85, both hemispheres 22.8
2245 Female, age 91, both hemispheres 22.5
1850 Male, age 80, both hemispheres 21.6
2250 Female, age 67, right hemisphere 21.5
2018 Male, age 76, both hemispheres 21.1
2532 Female, age 72, left hemisphere 20.8
Perirhinal gyrus
nTPM: 22.9
1847 Female, age 91, left hemisphere 24.7
2848 Male, age 76, right hemisphere 23.2
1794 Male, age 80, right hemisphere 22.4
2521 Female, age 94, right hemisphere 22.4
1841 Female, age 85, right hemisphere 21.8
Subiculum
nTPM: 20.6
1977 Female, age 85, both hemispheres 23.2
2729 Female, age 91, right hemisphere 22.8
2619 Male, age 74, both hemispheres 22.5
1901 Male, age 80, both hemispheres 19.7
2042 Male, age 76, both hemispheres 17.9
2438 Female, age 94, left hemisphere 17.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.8
Samples: 197

Max nTPM: 36.3
Min nTPM: 7.0
Std nTPM: 5.5
Median nTPM: 20.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 36.3
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 33.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 32.9
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 32.4
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 32.0
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 31.6
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 30.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 30.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 30.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 29.9
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 29.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 9.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 9.2
FF:10153-102I9 76 years, female 15.3
FF:10169-103B7 60 years, female 3.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 99.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 96.1
Samples: 4

Max nTPM: 100.2
Min nTPM: 88.9
Sample A Male 88.9
Sample B Male 100.2
Sample C Female 97.1
Sample D Female 98.3
Hippocampal formation
nTPM: 99.8
Samples: 4

Max nTPM: 103.2
Min nTPM: 97.2
Sample A Male 103.2
Sample B Male 97.4
Sample C Female 97.2
Sample D Female 101.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.1
69079996 Antisense, RP_050324_01_B08, Mouse strain C57BL/6J (56 days, male) 9.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
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