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LGALS1
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  • LGALS1
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Low
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:350.6 nTPM
FANTOM5:117.0 Scaled Tags Per Million
Pig:30.5 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA000646Antibody CAB002157
Glial cells LowLow
Neuronal cells Medium-




CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 350.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 350.6
Samples: 246

Max nTPM: 1453.2
Min nTPM: 84.8
Std nTPM: 163.9
Median nTPM: 318.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 1453.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 867.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 818.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 788.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 757.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 742.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 713.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 709.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 663.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 655.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 648.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 647.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 626.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 624.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 621.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 621.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 605.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 597.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 595.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 589.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 583.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 561.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 552.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 547.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 544.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 541.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 537.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 536.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 526.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 524.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 524.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 507.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 507.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 506.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 505.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 503.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 503.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 500.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 495.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 494.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 494.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 493.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 490.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 490.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 487.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 486.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 483.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 483.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 482.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 478.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 475.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 472.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 468.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 461.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 461.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 452.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 451.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 450.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 450.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 450.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 440.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 437.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 437.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 434.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 434.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 428.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 426.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 419.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 418.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 414.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 414.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 412.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 410.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 409.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 409.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 403.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 401.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 400.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 400.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 398.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 397.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 393.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 393.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 392.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 391.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 390.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 389.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 389.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 385.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 381.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 381.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 380.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 378.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 369.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 368.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 365.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 362.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 361.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 360.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 355.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 354.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 353.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 353.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 353.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 352.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 351.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 351.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 347.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 345.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 343.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 342.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 339.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 334.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 333.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 331.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 328.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 328.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 328.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 325.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 323.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 323.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 321.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 319.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 316.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 312.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 310.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 308.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 307.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 306.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 306.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 305.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 305.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 304.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 304.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 299.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 298.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 297.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 296.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 294.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 293.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 289.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 288.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 287.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 286.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 284.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 283.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 283.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 280.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 280.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 279.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 278.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 277.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 276.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 275.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 272.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 269.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 268.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 267.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 267.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 266.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 266.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 265.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 264.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 263.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 263.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 263.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 262.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 262.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 262.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 262.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 261.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 257.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 257.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 255.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 255.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 253.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 253.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 252.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 251.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 247.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 247.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 246.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 244.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 241.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 241.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 240.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 232.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 230.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 227.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 225.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 223.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 223.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 222.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 221.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 214.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 214.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 213.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 213.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 212.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 210.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 210.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 210.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 207.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 207.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 207.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 204.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 195.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 194.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 192.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 191.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 188.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 186.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 185.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 184.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 182.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 180.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 180.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 178.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 177.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 177.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 177.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 176.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 176.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 175.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 174.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 174.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 174.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 173.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 171.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 169.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 168.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 168.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 153.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 150.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 149.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 148.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 146.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 146.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 145.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 144.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 134.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 127.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 103.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 103.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 94.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 84.8
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 117.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 117.0
FF:10164-103B2 76 years, female 117.0

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 30.5
Pig sample Sample description nTPM
Caudate
nTPM: 30.5
Samples: 4

Max nTPM: 38.0
Min nTPM: 23.8
Sample A Female 34.3
Sample B Female 38.0
Sample C Male 23.8
Sample D Male 25.9

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