HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:12.9 nTPM
HPA:12.9 nTPM
GTEx:8.7 nTPM
FANTOM5:26.2 Scaled Tags Per Million
Pig:13.5 nTPM
Mouse:25.5 nTPM
Allen mouse:7.7 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 12.9
Sample id Sample description nTPM
Hippocampus
nTPM: 11.5
2148 Female, age 91, left hemisphere 12.5
2529 Female, age 94, left hemisphere 12.2
2621 Female, age 67, right hemisphere 11.9
1898 Male, age 80, left hemisphere 10.8
1911 Female, age 85, right hemisphere 10.8
1855 Male, age 76, left hemisphere 10.7
Dentate gyrus
nTPM: 11.9
2531 Female, age 67, both hemispheres 13.4
1927 Female, age 91, both hemispheres 12.8
2528 Male, age 74, both hemispheres 12.4
2246 Female, age 85, both hemispheres 11.8
2010 Male, age 76, both hemispheres 10.7
2530 Female, age 94, left hemisphere 10.5
Entorhinal gyrus
nTPM: 12.5
1938 Female, age 85, left hemisphere 13.7
2117 Female, age 91, right hemisphere 13.3
1787 Male, age 76, left hemisphere 12.9
2764 Male, age 80, right hemisphere 12.4
2613 Female, age 94, left hemisphere 12.0
2686 Male, age 75, right hemisphere 10.8
Hippocampus, CA1
nTPM: 12.7
2045 Male, age 76, both hemispheres 14.0
2527 Male, age 74, both hemispheres 13.4
1873 Female, age 85, both hemispheres 12.5
2082 Female, age 91, right hemisphere 12.2
2749 Male, age 80, left hemisphere 11.6
Hippocampus, CA2
nTPM: 11.4
2113 Female, age 91, right hemisphere 12.5
2437 Female, age 94, left hemisphere 11.6
2249 Male, age 74, both hemispheres 11.4
1940 Female, age 85, left hemisphere 11.2
1963 Male, age 80, left hemisphere 11.2
1892 Male, age 76, both hemispheres 10.3
Hippocampus, CA3
nTPM: 12.2
2620 Female, age 94, left hemisphere 13.6
2436 Male, age 74, both hemispheres 12.8
2861 Female, age 67, both hemispheres 12.2
1891 Female, age 85, both hemispheres 12.0
1867 Male, age 76, both hemispheres 11.9
2137 Male, age 80, left hemisphere 10.8
Parahippocampal cortex
nTPM: 12.1
1933 Female, age 85, both hemispheres 13.2
2692 Male, age 74, both hemispheres 13.2
2245 Female, age 91, both hemispheres 13.1
2532 Female, age 72, left hemisphere 13.0
2018 Male, age 76, both hemispheres 12.5
1850 Male, age 80, both hemispheres 11.8
2250 Female, age 67, right hemisphere 11.7
2622 Female, age 67, right hemisphere 11.7
1990 Female, age 91, right hemisphere 11.0
2693 Female, age 94, both hemispheres 10.3
Perirhinal gyrus
nTPM: 12.9
1841 Female, age 85, right hemisphere 14.0
1794 Male, age 80, right hemisphere 13.3
2848 Male, age 76, right hemisphere 12.8
1847 Female, age 91, left hemisphere 12.7
2521 Female, age 94, right hemisphere 11.8
Subiculum
nTPM: 12.2
2042 Male, age 76, both hemispheres 12.6
2438 Female, age 94, left hemisphere 12.4
1901 Male, age 80, both hemispheres 12.3
2729 Female, age 91, right hemisphere 12.2
1977 Female, age 85, both hemispheres 12.0
2619 Male, age 74, both hemispheres 11.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 8.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 8.7
Samples: 197

Max nTPM: 20.5
Min nTPM: 4.6
Std nTPM: 1.8
Median nTPM: 8.6
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 20.5
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 15.8
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 15.0
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 12.8
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 12.3
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 11.7
GTEX-ZDXO-0011-R1a-SM-4WKF4 60-69 years, male 11.7
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 11.4
GTEX-13G51-0011-R1a-SM-5LZYR 60-69 years, male 11.3
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 11.3
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 11.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 26.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 26.2
FF:10153-102I9 76 years, female 26.3
FF:10169-103B7 60 years, female 26.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 13.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 13.5
Samples: 4

Max nTPM: 15.2
Min nTPM: 12.2
Sample A Female 15.2
Sample B Female 13.9
Sample C Male 12.2
Sample D Male 12.7
Entorhinal cortex
nTPM: 13.2
Samples: 4

Max nTPM: 13.9
Min nTPM: 12.4
Sample A Female 13.9
Sample B Female 13.2
Sample C Male 13.1
Sample D Male 12.4
Subiculum
nTPM: 12.3
Samples: 4

Max nTPM: 14.5
Min nTPM: 11.4
Sample A Female 14.5
Sample B Female 11.4
Sample C Male 11.4
Sample D Male 11.7
Ventral hippocampus
nTPM: 12.8
Samples: 4

Max nTPM: 15.5
Min nTPM: 11.0
Sample A Female 12.6
Sample B Female 11.0
Sample C Male 15.5
Sample D Male 12.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 25.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 25.5
Samples: 4

Max nTPM: 28.3
Min nTPM: 23.0
Sample A Male 24.0
Sample B Male 26.6
Sample C Female 23.0
Sample D Female 28.3
Hippocampal formation
nTPM: 24.6
Samples: 4

Max nTPM: 26.0
Min nTPM: 22.5
Sample A Male 22.5
Sample B Male 25.7
Sample C Female 26.0
Sample D Female 24.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.7
70526028 Antisense, RP_050317_04_G12, Mouse strain C57BL/6J (56 days, male) 7.7

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