HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:22.5 nTPM
HPA:22.5 nTPM
GTEx:15.7 nTPM
FANTOM5:60.1 Scaled Tags Per Million
Pig:49.8 nTPM
Mouse:79.7 nTPM
Allen mouse:2.7 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 22.5
Sample id Sample description nTPM
Hippocampus
nTPM: 21.9
2529 Female, age 94, left hemisphere 23.6
1898 Male, age 80, left hemisphere 22.7
2621 Female, age 67, right hemisphere 21.8
1855 Male, age 76, left hemisphere 21.3
2148 Female, age 91, left hemisphere 21.1
1911 Female, age 85, right hemisphere 20.7
Dentate gyrus
nTPM: 22.3
2010 Male, age 76, both hemispheres 27.1
2530 Female, age 94, left hemisphere 22.4
2528 Male, age 74, both hemispheres 22.2
2531 Female, age 67, both hemispheres 21.8
2246 Female, age 85, both hemispheres 20.3
1927 Female, age 91, both hemispheres 20.0
Entorhinal gyrus
nTPM: 21.2
1787 Male, age 76, left hemisphere 23.3
1938 Female, age 85, left hemisphere 22.9
2117 Female, age 91, right hemisphere 22.6
2764 Male, age 80, right hemisphere 21.2
2686 Male, age 75, right hemisphere 18.8
2613 Female, age 94, left hemisphere 18.3
Hippocampus, CA1
nTPM: 21.0
2045 Male, age 76, both hemispheres 24.5
2527 Male, age 74, both hemispheres 22.4
2082 Female, age 91, right hemisphere 19.5
1873 Female, age 85, both hemispheres 19.3
2749 Male, age 80, left hemisphere 19.1
Hippocampus, CA2
nTPM: 21.3
2249 Male, age 74, both hemispheres 23.0
1940 Female, age 85, left hemisphere 22.1
2113 Female, age 91, right hemisphere 21.5
1963 Male, age 80, left hemisphere 21.3
2437 Female, age 94, left hemisphere 20.9
1892 Male, age 76, both hemispheres 18.7
Hippocampus, CA3
nTPM: 22.3
2436 Male, age 74, both hemispheres 27.8
1867 Male, age 76, both hemispheres 23.7
2620 Female, age 94, left hemisphere 21.9
2861 Female, age 67, both hemispheres 21.6
2137 Male, age 80, left hemisphere 19.8
1891 Female, age 85, both hemispheres 19.3
Parahippocampal cortex
nTPM: 21.9
2018 Male, age 76, both hemispheres 26.7
2250 Female, age 67, right hemisphere 26.0
1933 Female, age 85, both hemispheres 22.2
1990 Female, age 91, right hemisphere 22.0
2532 Female, age 72, left hemisphere 21.6
2245 Female, age 91, both hemispheres 20.8
2692 Male, age 74, both hemispheres 20.7
1850 Male, age 80, both hemispheres 20.3
2622 Female, age 67, right hemisphere 19.6
2693 Female, age 94, both hemispheres 18.9
Perirhinal gyrus
nTPM: 21.6
1841 Female, age 85, right hemisphere 22.9
2521 Female, age 94, right hemisphere 22.7
1847 Female, age 91, left hemisphere 21.8
1794 Male, age 80, right hemisphere 20.6
2848 Male, age 76, right hemisphere 19.9
Subiculum
nTPM: 22.5
2042 Male, age 76, both hemispheres 26.1
2729 Female, age 91, right hemisphere 23.0
1977 Female, age 85, both hemispheres 22.7
2619 Male, age 74, both hemispheres 22.0
2438 Female, age 94, left hemisphere 21.6
1901 Male, age 80, both hemispheres 19.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.7
Samples: 197

Max nTPM: 84.4
Min nTPM: 5.7
Std nTPM: 9.0
Median nTPM: 13.1
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 84.4
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 52.2
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 46.3
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 42.5
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 40.2
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 39.9
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 37.2
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 34.9
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 34.5
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 34.0
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 31.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 60.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 60.1
FF:10169-103B7 60 years, female 60.6
FF:10153-102I9 76 years, female 59.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 49.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 49.8
Samples: 4

Max nTPM: 62.0
Min nTPM: 40.0
Sample A Female 62.0
Sample B Female 48.6
Sample C Male 48.5
Sample D Male 40.0
Entorhinal cortex
nTPM: 49.1
Samples: 4

Max nTPM: 55.0
Min nTPM: 38.9
Sample A Female 55.0
Sample B Female 54.0
Sample C Male 48.4
Sample D Male 38.9
Subiculum
nTPM: 47.1
Samples: 4

Max nTPM: 64.5
Min nTPM: 38.2
Sample A Female 64.5
Sample B Female 44.1
Sample C Male 38.2
Sample D Male 41.5
Ventral hippocampus
nTPM: 45.8
Samples: 4

Max nTPM: 52.2
Min nTPM: 37.5
Sample A Female 48.4
Sample B Female 37.5
Sample C Male 52.2
Sample D Male 45.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 79.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 79.7
Samples: 4

Max nTPM: 87.4
Min nTPM: 67.1
Sample A Male 67.1
Sample B Male 79.4
Sample C Female 85.0
Sample D Female 87.4
Hippocampal formation
nTPM: 70.0
Samples: 4

Max nTPM: 78.2
Min nTPM: 60.1
Sample A Male 64.9
Sample B Male 60.1
Sample C Female 78.2
Sample D Female 76.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.7
1119 Antisense, RP_Baylor_103124, Mouse strain C57BL/6J (56 days, male) 5.4
1120 Antisense, RP_Baylor_103124, Mouse strain C57BL/6J (56 days, male) 1.5
1121 Sense, RPS_Baylor_37066, Mouse strain C57BL/6J (56 days, male) 0.0

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