HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:25.4 nTPM
HPA:25.4 nTPM
GTEx:30.0 nTPM
FANTOM5:74.0 Scaled Tags Per Million
Pig:16.8 nTPM
Mouse:27.3 nTPM
Allen mouse:17.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA075438
Glial cells High
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 25.4
Sample id Sample description nTPM
Hippocampus
nTPM: 23.5
2148 Female, age 91, left hemisphere 26.7
1855 Male, age 76, left hemisphere 24.0
2529 Female, age 94, left hemisphere 23.4
1898 Male, age 80, left hemisphere 23.2
2621 Female, age 67, right hemisphere 23.2
1911 Female, age 85, right hemisphere 20.3
Dentate gyrus
nTPM: 24.0
1927 Female, age 91, both hemispheres 27.0
2531 Female, age 67, both hemispheres 24.8
2530 Female, age 94, left hemisphere 24.7
2528 Male, age 74, both hemispheres 23.2
2010 Male, age 76, both hemispheres 23.0
2246 Female, age 85, both hemispheres 21.4
Entorhinal gyrus
nTPM: 25.4
2613 Female, age 94, left hemisphere 31.5
2764 Male, age 80, right hemisphere 27.5
2686 Male, age 75, right hemisphere 26.3
1787 Male, age 76, left hemisphere 24.7
1938 Female, age 85, left hemisphere 21.9
2117 Female, age 91, right hemisphere 20.7
Hippocampus, CA1
nTPM: 25.1
2749 Male, age 80, left hemisphere 33.5
2045 Male, age 76, both hemispheres 24.0
2082 Female, age 91, right hemisphere 22.9
2527 Male, age 74, both hemispheres 22.9
1873 Female, age 85, both hemispheres 22.5
Hippocampus, CA2
nTPM: 23.7
1963 Male, age 80, left hemisphere 31.2
1892 Male, age 76, both hemispheres 25.3
2437 Female, age 94, left hemisphere 23.9
2113 Female, age 91, right hemisphere 22.5
1940 Female, age 85, left hemisphere 19.7
2249 Male, age 74, both hemispheres 19.7
Hippocampus, CA3
nTPM: 24.2
2137 Male, age 80, left hemisphere 28.4
2620 Female, age 94, left hemisphere 28.3
2861 Female, age 67, both hemispheres 24.8
1867 Male, age 76, both hemispheres 23.4
2436 Male, age 74, both hemispheres 20.9
1891 Female, age 85, both hemispheres 19.3
Parahippocampal cortex
nTPM: 22.9
2622 Female, age 67, right hemisphere 25.4
2693 Female, age 94, both hemispheres 24.3
2245 Female, age 91, both hemispheres 23.7
2692 Male, age 74, both hemispheres 23.5
1990 Female, age 91, right hemisphere 22.8
2532 Female, age 72, left hemisphere 22.6
1850 Male, age 80, both hemispheres 22.1
2018 Male, age 76, both hemispheres 22.0
1933 Female, age 85, both hemispheres 21.4
2250 Female, age 67, right hemisphere 20.9
Perirhinal gyrus
nTPM: 22.9
2521 Female, age 94, right hemisphere 25.4
1794 Male, age 80, right hemisphere 24.1
1847 Female, age 91, left hemisphere 24.0
2848 Male, age 76, right hemisphere 21.7
1841 Female, age 85, right hemisphere 19.1
Subiculum
nTPM: 21.8
2729 Female, age 91, right hemisphere 23.8
2619 Male, age 74, both hemispheres 23.4
1901 Male, age 80, both hemispheres 21.6
1977 Female, age 85, both hemispheres 21.3
2438 Female, age 94, left hemisphere 21.2
2042 Male, age 76, both hemispheres 19.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 30.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 30.0
Samples: 197

Max nTPM: 51.8
Min nTPM: 15.4
Std nTPM: 6.8
Median nTPM: 28.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 51.8
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 48.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 44.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 44.8
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 44.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 44.8
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 44.6
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 44.5
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 42.1
GTEX-1IDJH-0011-R1b-SM-ARU6U 70-79 years, male 41.7
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 41.6
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 74.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 74.0
FF:10169-103B7 60 years, female 75.3
FF:10153-102I9 76 years, female 72.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 16.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 15.5
Samples: 4

Max nTPM: 16.5
Min nTPM: 14.7
Sample A Female 15.9
Sample B Female 16.5
Sample C Male 15.0
Sample D Male 14.7
Entorhinal cortex
nTPM: 16.8
Samples: 4

Max nTPM: 18.4
Min nTPM: 16.1
Sample A Female 16.1
Sample B Female 16.1
Sample C Male 18.4
Sample D Male 16.7
Subiculum
nTPM: 16.5
Samples: 4

Max nTPM: 20.4
Min nTPM: 14.1
Sample A Female 20.4
Sample B Female 16.1
Sample C Male 15.5
Sample D Male 14.1
Ventral hippocampus
nTPM: 16.9
Samples: 4

Max nTPM: 20.2
Min nTPM: 14.5
Sample A Female 15.4
Sample B Female 14.5
Sample C Male 20.2
Sample D Male 17.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 27.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 25.5
Samples: 4

Max nTPM: 28.7
Min nTPM: 23.4
Sample A Male 24.2
Sample B Male 28.7
Sample C Female 23.4
Sample D Female 25.5
Hippocampal formation
nTPM: 27.3
Samples: 4

Max nTPM: 28.0
Min nTPM: 25.7
Sample A Male 27.9
Sample B Male 27.4
Sample C Female 25.7
Sample D Female 28.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 17.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.2
67787331 Antisense, RP_040916_02_G08, Mouse strain C57BL/6J (56 days, male) 17.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.