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KCTD17
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  • KCTD17
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Low
Neuronal cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:142.4 nTPM
FANTOM5:80.6 Scaled Tags Per Million
Pig:38.6 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA018459
Glial cells Low
Neuronal cells High



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 142.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 142.4
Samples: 246

Max nTPM: 279.7
Min nTPM: 33.3
Std nTPM: 55.3
Median nTPM: 145.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 279.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 276.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 270.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 269.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 256.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 255.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 254.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 247.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 247.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 243.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 235.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 232.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 231.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 230.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 230.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 229.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 227.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 225.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 225.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 224.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 222.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 220.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 218.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 217.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 217.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 216.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 212.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 209.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 209.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 209.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 206.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 206.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 205.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 204.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 204.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 203.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 202.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 202.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 201.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 200.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 200.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 200.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 200.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 198.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 196.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 196.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 195.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 194.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 194.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 192.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 191.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 190.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 189.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 188.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 188.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 186.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 185.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 184.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 184.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 182.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 182.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 180.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 180.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 179.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 179.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 179.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 179.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 178.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 177.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 177.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 176.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 176.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 175.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 175.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 174.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 174.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 174.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 173.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 173.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 172.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 172.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 170.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 169.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 168.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 167.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 166.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 166.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 165.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 164.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 163.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 162.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 162.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 161.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 161.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 160.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 160.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 159.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 158.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 157.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 157.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 156.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 156.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 154.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 154.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 153.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 153.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 153.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 152.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 150.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 149.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 149.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 149.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 148.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 148.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 148.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 148.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 148.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 148.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 147.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 147.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 147.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 146.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 145.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 145.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 143.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 141.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 141.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 140.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 139.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 139.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 138.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 138.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 137.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 136.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 136.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 134.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 134.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 133.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 132.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 130.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 130.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 129.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 129.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 128.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 128.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 127.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 127.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 127.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 126.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 125.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 124.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 123.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 122.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 121.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 120.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 120.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 118.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 117.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 116.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 115.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 115.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 115.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 112.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 112.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 112.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 112.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 112.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 107.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 106.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 105.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 104.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 104.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 103.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 102.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 101.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 100.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 99.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 98.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 98.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 98.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 98.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 97.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 97.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 95.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 94.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 93.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 93.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 92.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 91.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 90.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 90.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 90.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 90.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 89.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 89.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 87.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 87.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 86.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 86.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 86.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 85.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 85.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 85.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 84.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 83.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 81.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 80.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 79.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 79.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 79.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 79.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 78.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 76.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 74.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 73.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 71.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 70.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 68.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 67.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 67.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 67.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 67.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 67.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 67.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 67.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 65.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 64.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 64.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 62.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 60.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 60.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 60.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 60.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 58.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 58.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 58.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 56.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 56.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 56.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 56.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 53.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 48.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 45.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 43.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 37.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 33.3
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 80.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 80.6
FF:10164-103B2 76 years, female 80.6

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 38.6
Pig sample Sample description nTPM
Caudate
nTPM: 38.6
Samples: 4

Max nTPM: 59.7
Min nTPM: 20.3
Sample A Female 20.3
Sample B Female 29.5
Sample C Male 59.7
Sample D Male 45.0

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