HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:101.9 nTPM
HPA:101.9 nTPM
GTEx:95.7 nTPM
FANTOM5:66.2 Scaled Tags Per Million
Pig:53.7 nTPM
Mouse:223.0 nTPM
Allen mouse:2.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA000864Antibody CAB012232Antibody CAB012520
Glial cells MediumMediumNot detected
Neuronal cells HighHighHigh







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 101.9
Sample id Sample description nTPM
Hippocampus
nTPM: 97.6
1898 Male, age 80, left hemisphere 102.6
1855 Male, age 76, left hemisphere 98.1
2529 Female, age 94, left hemisphere 97.9
2621 Female, age 67, right hemisphere 96.1
1911 Female, age 85, right hemisphere 95.8
2148 Female, age 91, left hemisphere 95.0
Dentate gyrus
nTPM: 97.7
1927 Female, age 91, both hemispheres 100.4
2010 Male, age 76, both hemispheres 99.2
2530 Female, age 94, left hemisphere 98.9
2246 Female, age 85, both hemispheres 97.5
2531 Female, age 67, both hemispheres 95.4
2528 Male, age 74, both hemispheres 94.5
Entorhinal gyrus
nTPM: 97.8
1938 Female, age 85, left hemisphere 101.2
2686 Male, age 75, right hemisphere 98.9
2764 Male, age 80, right hemisphere 98.1
2613 Female, age 94, left hemisphere 97.2
1787 Male, age 76, left hemisphere 96.9
2117 Female, age 91, right hemisphere 94.6
Hippocampus, CA1
nTPM: 99.0
2749 Male, age 80, left hemisphere 106.6
1873 Female, age 85, both hemispheres 101.5
2527 Male, age 74, both hemispheres 96.3
2045 Male, age 76, both hemispheres 95.7
2082 Female, age 91, right hemisphere 94.8
Hippocampus, CA2
nTPM: 98.9
1892 Male, age 76, both hemispheres 106.0
1963 Male, age 80, left hemisphere 102.8
2437 Female, age 94, left hemisphere 96.9
2249 Male, age 74, both hemispheres 96.2
2113 Female, age 91, right hemisphere 96.0
1940 Female, age 85, left hemisphere 95.6
Hippocampus, CA3
nTPM: 96.9
2137 Male, age 80, left hemisphere 103.2
1867 Male, age 76, both hemispheres 100.6
1891 Female, age 85, both hemispheres 97.6
2436 Male, age 74, both hemispheres 94.1
2861 Female, age 67, both hemispheres 93.6
2620 Female, age 94, left hemisphere 92.1
Parahippocampal cortex
nTPM: 99.4
1850 Male, age 80, both hemispheres 104.6
1933 Female, age 85, both hemispheres 101.8
1990 Female, age 91, right hemisphere 101.7
2532 Female, age 72, left hemisphere 100.6
2245 Female, age 91, both hemispheres 99.2
2693 Female, age 94, both hemispheres 99.0
2018 Male, age 76, both hemispheres 98.7
2250 Female, age 67, right hemisphere 97.9
2622 Female, age 67, right hemisphere 95.7
2692 Male, age 74, both hemispheres 94.4
Perirhinal gyrus
nTPM: 101.9
1841 Female, age 85, right hemisphere 105.9
1847 Female, age 91, left hemisphere 103.3
1794 Male, age 80, right hemisphere 101.2
2848 Male, age 76, right hemisphere 100.9
2521 Female, age 94, right hemisphere 98.4
Subiculum
nTPM: 97.4
1977 Female, age 85, both hemispheres 100.6
1901 Male, age 80, both hemispheres 100.3
2438 Female, age 94, left hemisphere 99.3
2042 Male, age 76, both hemispheres 95.6
2729 Female, age 91, right hemisphere 94.7
2619 Male, age 74, both hemispheres 93.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 95.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 95.7
Samples: 197

Max nTPM: 226.8
Min nTPM: 49.0
Std nTPM: 25.4
Median nTPM: 91.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 226.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 172.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 155.4
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 154.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 153.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 152.8
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 149.7
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 148.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 147.0
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 146.4
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 143.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 66.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 66.2
FF:10169-103B7 60 years, female 77.4
FF:10153-102I9 76 years, female 55.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 53.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 53.7
Samples: 4

Max nTPM: 72.1
Min nTPM: 38.6
Sample A Female 72.1
Sample B Female 48.1
Sample C Male 56.1
Sample D Male 38.6
Entorhinal cortex
nTPM: 48.7
Samples: 4

Max nTPM: 56.9
Min nTPM: 42.7
Sample A Female 51.6
Sample B Female 56.9
Sample C Male 43.6
Sample D Male 42.7
Subiculum
nTPM: 46.9
Samples: 4

Max nTPM: 61.2
Min nTPM: 41.3
Sample A Female 61.2
Sample B Female 41.5
Sample C Male 41.3
Sample D Male 43.4
Ventral hippocampus
nTPM: 48.2
Samples: 4

Max nTPM: 59.7
Min nTPM: 37.0
Sample A Female 56.3
Sample B Female 37.0
Sample C Male 39.6
Sample D Male 59.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 223.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 223.0
Samples: 4

Max nTPM: 253.8
Min nTPM: 199.8
Sample A Male 217.9
Sample B Male 253.8
Sample C Female 220.6
Sample D Female 199.8
Hippocampal formation
nTPM: 207.3
Samples: 4

Max nTPM: 249.2
Min nTPM: 181.7
Sample A Male 249.2
Sample B Male 205.3
Sample C Female 181.7
Sample D Female 192.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.7
632493 Antisense, RP_040907_01_E01, Mouse strain C57BL/6J (56 days, male) 2.7

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