HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:39.8 nTPM
HPA:39.8 nTPM
GTEx:8.1 nTPM
FANTOM5:102.3 Scaled Tags Per Million
Pig:43.6 nTPM
Mouse:78.5 nTPM
Allen mouse:6.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042823
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 39.8
Sample id Sample description nTPM
Hippocampus
nTPM: 38.1
1898 Male, age 80, left hemisphere 42.1
2529 Female, age 94, left hemisphere 38.9
2621 Female, age 67, right hemisphere 38.6
1855 Male, age 76, left hemisphere 36.9
2148 Female, age 91, left hemisphere 36.3
1911 Female, age 85, right hemisphere 35.9
Dentate gyrus
nTPM: 37.4
1927 Female, age 91, both hemispheres 39.7
2010 Male, age 76, both hemispheres 38.9
2530 Female, age 94, left hemisphere 37.7
2528 Male, age 74, both hemispheres 37.2
2246 Female, age 85, both hemispheres 37.1
2531 Female, age 67, both hemispheres 34.0
Entorhinal gyrus
nTPM: 37.5
2764 Male, age 80, right hemisphere 40.1
1938 Female, age 85, left hemisphere 39.7
2117 Female, age 91, right hemisphere 37.5
1787 Male, age 76, left hemisphere 36.7
2686 Male, age 75, right hemisphere 36.1
2613 Female, age 94, left hemisphere 35.1
Hippocampus, CA1
nTPM: 38.7
2749 Male, age 80, left hemisphere 44.3
1873 Female, age 85, both hemispheres 39.4
2045 Male, age 76, both hemispheres 36.9
2527 Male, age 74, both hemispheres 36.9
2082 Female, age 91, right hemisphere 36.0
Hippocampus, CA2
nTPM: 39.0
1892 Male, age 76, both hemispheres 42.7
1963 Male, age 80, left hemisphere 41.3
2437 Female, age 94, left hemisphere 38.4
1940 Female, age 85, left hemisphere 38.1
2249 Male, age 74, both hemispheres 37.7
2113 Female, age 91, right hemisphere 35.8
Hippocampus, CA3
nTPM: 37.3
2137 Male, age 80, left hemisphere 41.0
1867 Male, age 76, both hemispheres 40.5
2436 Male, age 74, both hemispheres 38.1
1891 Female, age 85, both hemispheres 37.7
2861 Female, age 67, both hemispheres 33.3
2620 Female, age 94, left hemisphere 33.2
Parahippocampal cortex
nTPM: 37.4
1850 Male, age 80, both hemispheres 41.9
1990 Female, age 91, right hemisphere 39.4
1933 Female, age 85, both hemispheres 38.7
2245 Female, age 91, both hemispheres 38.0
2250 Female, age 67, right hemisphere 37.1
2532 Female, age 72, left hemisphere 37.0
2018 Male, age 76, both hemispheres 36.7
2692 Male, age 74, both hemispheres 36.6
2693 Female, age 94, both hemispheres 35.9
2622 Female, age 67, right hemisphere 33.0
Perirhinal gyrus
nTPM: 39.8
1847 Female, age 91, left hemisphere 42.1
1841 Female, age 85, right hemisphere 41.6
1794 Male, age 80, right hemisphere 40.2
2521 Female, age 94, right hemisphere 38.0
2848 Male, age 76, right hemisphere 37.1
Subiculum
nTPM: 36.6
1901 Male, age 80, both hemispheres 39.0
1977 Female, age 85, both hemispheres 39.0
2042 Male, age 76, both hemispheres 35.9
2619 Male, age 74, both hemispheres 35.6
2729 Female, age 91, right hemisphere 35.3
2438 Female, age 94, left hemisphere 35.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 8.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 8.1
Samples: 197

Max nTPM: 30.5
Min nTPM: 0.2
Std nTPM: 5.7
Median nTPM: 7.0
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 30.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 26.5
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 23.1
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 22.7
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 22.5
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 22.0
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 21.9
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 21.1
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 18.7
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 17.9
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 17.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 102.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 102.3
FF:10169-103B7 60 years, female 122.4
FF:10153-102I9 76 years, female 82.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 43.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 43.6
Samples: 4

Max nTPM: 55.6
Min nTPM: 35.3
Sample A Female 55.6
Sample B Female 41.6
Sample C Male 41.9
Sample D Male 35.3
Entorhinal cortex
nTPM: 36.5
Samples: 4

Max nTPM: 43.1
Min nTPM: 31.1
Sample A Female 36.4
Sample B Female 43.1
Sample C Male 35.4
Sample D Male 31.1
Subiculum
nTPM: 36.0
Samples: 4

Max nTPM: 44.4
Min nTPM: 30.8
Sample A Female 44.4
Sample B Female 32.9
Sample C Male 30.8
Sample D Male 35.8
Ventral hippocampus
nTPM: 35.2
Samples: 4

Max nTPM: 41.5
Min nTPM: 31.1
Sample A Female 41.5
Sample B Female 31.1
Sample C Male 31.1
Sample D Male 37.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 78.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 73.8
Samples: 4

Max nTPM: 80.0
Min nTPM: 65.0
Sample A Male 71.8
Sample B Male 80.0
Sample C Female 78.5
Sample D Female 65.0
Hippocampal formation
nTPM: 78.5
Samples: 4

Max nTPM: 91.6
Min nTPM: 71.7
Sample A Male 91.6
Sample B Male 73.4
Sample C Female 71.7
Sample D Female 77.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.4
81600150 Antisense, RP_080320_01_G07, Mouse strain C57BL/6J (56 days, male) 7.0
69817420 Antisense, RP_050510_03_D02, Mouse strain C57BL/6J (56 days, male) 6.1
70919681 Antisense, RP_050713_01_H04, Mouse strain C57BL/6J (56 days, male) 6.0
73512205 Antisense, RP_050713_01_H04, Mouse strain C57BL/6J (56 days, male) 2.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
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