COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:66.5 nTPM
HPA:1.5 nTPM
GTEx:66.5 nTPM
FANTOM5:41.3 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 1.5
overview
Male, age 54 		Colon sample 67
nTPM: 2.1
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 2.4
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 1.9
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 0.2
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 3.6
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 1.1
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 0.9
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 2.4
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 1.5
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 1.2
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 0.3
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 0.7
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 0.8
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 66.5
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 66.5
Samples: 373

Max nTPM: 194.4
Min nTPM: 2.9
Std nTPM: 28.7
Median nTPM: 66.8
GTEX-1LB8K-2526-SM-DIPEQ 50-59 years, male 194.4
GTEX-15RJ7-1726-SM-6PAL3 40-49 years, male 170.0
GTEX-1N2EF-1726-SM-EXUSI 60-69 years, male 165.3
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 138.1
GTEX-1GN73-2726-SM-9WYUB 60-69 years, male 133.1
GTEX-1PBJJ-2026-SM-DTX8U 30-39 years, male 132.9
GTEX-17F96-2126-SM-7KFSM 70-79 years, male 124.9
GTEX-18A6Q-2226-SM-7LG61 60-69 years, male 124.6
GTEX-ZPU1-1726-SM-4WWFV 40-49 years, male 119.0
GTEX-12WSM-1426-SM-5GCPA 60-69 years, male 118.9
GTEX-1CB4F-1926-SM-7MKFN 60-69 years, male 117.5
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Colon - Transverse
Average nTPM: 29.4
Samples: 406

Max nTPM: 145.7
Min nTPM: 0.5
Std nTPM: 26.8
Median nTPM: 21.7
GTEX-11GSP-1626-SM-5986N 60-69 years, female 145.7
GTEX-1LVAN-2526-SM-CNPPC 50-59 years, female 112.9
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 110.0
GTEX-18QFQ-1526-SM-72D57 30-39 years, male 104.9
GTEX-17F96-2026-SM-79ON4 70-79 years, male 104.5
GTEX-15CHC-1626-SM-5ZZWS 60-69 years, female 103.2
GTEX-WEY5-1426-SM-4LMJ3 40-49 years, female 102.8
GTEX-1LBAC-1626-SM-CXZKV 20-29 years, male 99.8
GTEX-17F9E-1826-SM-7IGMC 50-59 years, male 97.5
GTEX-1C2JI-1626-SM-7EPHC 50-59 years, male 93.1
GTEX-1CB4I-2226-SM-7P8SL 50-59 years, male 90.2
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 41.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 41.3
FF:10014-101C5 62,83,84 years, mixed 41.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.