COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Low
Glandular cells: Medium
Peripheral nerve/ganglion: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:60.4 nTPM
HPA:60.4 nTPM
GTEx:29.8 nTPM
FANTOM5:42.4 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA043054Antibody HPA046782
Endothelial cells Not detectedMedium
Glandular cells MediumHigh
Peripheral nerve/ganglion MediumMedium



COLON - HPA RNA-seqi
Average nTPM 60.4
overview
Male, age 54 		Colon sample 67
nTPM: 58.4
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 72.9
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 95.1
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 68.2
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 66.9
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 48
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 61.1
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 57.6
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 46.2
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 64.5
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 52.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 42.4
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 51.5
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 29.8
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 9.7
Samples: 373

Max nTPM: 56.1
Min nTPM: 3.7
Std nTPM: 5.9
Median nTPM: 8.5
GTEX-WOFM-1926-SM-4OOSP 20-29 years, male 56.1
GTEX-ZQUD-1026-SM-4YCEZ 30-39 years, male 50.7
GTEX-X5EB-1126-SM-46MVV 40-49 years, male 44.3
GTEX-VJYA-2126-SM-4KL1O 60-69 years, male 42.4
GTEX-W5WG-2026-SM-4LMIB 50-59 years, female 41.0
GTEX-13W3W-2226-SM-5LU4M 60-69 years, female 38.2
GTEX-1AMEY-1826-SM-72D5L 30-39 years, female 33.3
GTEX-WH7G-1426-SM-4LVMU 40-49 years, male 33.1
GTEX-Y5V6-1626-SM-4VDT2 60-69 years, male 32.8
GTEX-15FZZ-1826-SM-6LLJP 30-39 years, female 31.3
GTEX-WYJK-2326-SM-4ONDN 50-59 years, male 27.5
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Colon - Transverse
Average nTPM: 29.8
Samples: 406

Max nTPM: 116.2
Min nTPM: 5.4
Std nTPM: 23.2
Median nTPM: 23.5
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 116.2
GTEX-144GM-1226-SM-5LU52 20-29 years, male 110.9
GTEX-14XAO-2026-SM-69LOI 60-69 years, female 105.3
GTEX-1C475-1626-SM-731FP 40-49 years, female 100.2
GTEX-1IKOE-2026-SM-AHZ31 30-39 years, female 96.2
GTEX-111CU-1426-SM-5GZYP 50-59 years, male 95.8
GTEX-ZDTT-1926-SM-5HL5W 60-69 years, male 92.7
GTEX-ZT9W-1826-SM-51MQX 50-59 years, male 90.5
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 90.1
GTEX-1J1R8-1126-SM-CNPQ3 40-49 years, male 89.6
GTEX-1LVAM-1626-SM-EV79Y 50-59 years, female 87.4
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 42.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 42.4
FF:10014-101C5 62,83,84 years, mixed 42.4

Contact

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.