COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Medium
Glandular cells: Not detected
Peripheral nerve/ganglion: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:80.8 nTPM
HPA:80.8 nTPM
GTEx:78.1 nTPM
FANTOM5:79.2 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA049518
Endothelial cells Medium
Glandular cells Not detected
Peripheral nerve/ganglion High



COLON - HPA RNA-seqi
Average nTPM 80.8
overview
Male, age 54 		Colon sample 67
nTPM: 71.7
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 64.7
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 72.9
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 61.3
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 86.1
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 103.4
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 107.7
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 73.7
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 82.7
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 100.7
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 79.2
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 72.5
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 73.1
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 78.1
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 78.1
Samples: 373

Max nTPM: 273.1
Min nTPM: 42.5
Std nTPM: 18.9
Median nTPM: 75.9
GTEX-15RJ7-1726-SM-6PAL3 40-49 years, male 273.1
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 134.9
GTEX-1PIEJ-1826-SM-EWRMN 20-29 years, female 125.9
GTEX-ZLFU-1426-SM-4WWEU 40-49 years, male 125.2
GTEX-ZTSS-1226-SM-51MSZ 40-49 years, male 124.1
GTEX-1N2EF-1726-SM-EXUSI 60-69 years, male 120.5
GTEX-1K9T9-2926-SM-E9TKD 50-59 years, female 119.7
GTEX-1B8KE-1526-SM-7DUG2 50-59 years, male 117.3
GTEX-1L5NE-1926-SM-D3L9R 50-59 years, male 117.3
GTEX-1PBJJ-2026-SM-DTX8U 30-39 years, male 116.7
GTEX-ZT9W-1726-SM-51MS3 50-59 years, male 115.6
Show allShow less
Colon - Transverse
Average nTPM: 70.5
Samples: 406

Max nTPM: 150.7
Min nTPM: 41.4
Std nTPM: 15.1
Median nTPM: 68.5
GTEX-1IKOE-2026-SM-AHZ31 30-39 years, female 150.7
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 140.8
GTEX-1N2EF-1926-SM-DTX8M 60-69 years, male 124.7
GTEX-1OKEX-1226-SM-DTXEC 60-69 years, male 119.4
GTEX-QDVN-1326-SM-48TZ3 50-59 years, male 118.9
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 117.5
GTEX-13X6H-1926-SM-7EWD3 50-59 years, female 116.9
GTEX-111CU-1426-SM-5GZYP 50-59 years, male 112.3
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 111.6
GTEX-1LVAN-2526-SM-CNPPC 50-59 years, female 108.7
GTEX-146FQ-1926-SM-5NQBY 30-39 years, male 107.6
Show allShow less

COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 79.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 79.2
FF:10014-101C5 62,83,84 years, mixed 79.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.