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APEX1
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:54.3 nTPM
FANTOM5:95.5 Scaled Tags Per Million
Pig:36.5 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA002564Antibody CAB004294Antibody CAB047307
Glial cells MediumHighMedium
Neuronal cells MediumMediumMedium







CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 54.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 54.3
Samples: 246

Max nTPM: 92.7
Min nTPM: 35.1
Std nTPM: 9.1
Median nTPM: 53.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 92.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 91.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 89.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 81.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 81.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 79.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 79.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 77.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 75.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 74.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 73.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 70.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 70.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 69.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 69.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 68.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 67.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 66.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 66.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 65.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 65.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 65.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 65.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 65.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 64.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 64.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 64.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 63.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 63.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 63.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 63.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 63.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 63.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 63.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 63.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 62.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 62.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 62.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 62.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 61.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 61.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 61.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 61.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 60.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 60.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 60.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 60.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 60.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 60.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 60.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 60.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 60.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 59.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 59.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 59.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 59.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 59.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 59.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 59.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 58.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 58.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 58.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 58.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 58.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 58.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 58.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 57.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 57.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 57.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 57.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 57.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 57.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 57.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 57.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 57.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 57.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 57.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 57.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 57.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 56.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 56.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 56.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 56.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 56.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 56.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 56.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 56.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 56.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 56.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 56.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 56.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 56.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 56.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 56.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 56.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 56.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 55.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 55.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 55.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 55.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 55.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 55.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 55.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 55.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 54.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 54.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 54.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 54.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 54.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 54.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 54.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 54.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 54.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 54.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 53.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 53.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 53.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 53.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 53.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 53.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 53.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 53.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 53.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 53.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 53.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 53.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 52.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 52.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 52.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 52.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 52.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 52.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 52.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 52.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 52.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 52.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 52.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 52.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 52.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 51.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 51.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 51.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 51.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 51.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 51.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 51.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 51.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 51.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 51.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 51.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 50.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 50.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 50.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 50.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 50.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 50.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 50.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 50.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 50.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 50.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 50.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 50.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 50.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 50.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 50.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 50.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 50.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 50.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 49.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 49.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 49.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 49.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 49.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 49.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 49.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 49.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 48.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 48.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 48.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 48.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 48.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 48.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 48.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 48.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 48.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 48.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 47.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 47.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 47.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 47.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 47.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 47.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 47.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 47.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 47.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 47.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 47.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 47.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 46.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 46.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 46.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 46.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 46.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 46.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 46.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 46.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 46.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 46.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 46.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 46.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 46.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 45.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 45.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 45.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 45.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 45.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 45.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 45.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 45.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 45.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 45.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 44.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 44.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 44.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 44.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 43.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 43.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 43.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 43.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 42.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 42.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 42.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 41.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 41.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 41.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 41.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 40.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 39.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 39.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 39.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 39.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 39.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 39.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 35.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 35.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 35.1
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 95.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 95.5
FF:10164-103B2 76 years, female 95.5

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 36.5
Pig sample Sample description nTPM
Caudate
nTPM: 36.5
Samples: 4

Max nTPM: 41.6
Min nTPM: 32.7
Sample A Female 35.4
Sample B Female 36.2
Sample C Male 41.6
Sample D Male 32.7

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