HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:47.5 nTPM
HPA:47.5 nTPM
GTEx:28.7 nTPM
FANTOM5:58.3 Scaled Tags Per Million
Pig:80.7 nTPM
Mouse:78.3 nTPM
Allen mouse:1.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA046993
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 47.5
Sample id Sample description nTPM
Hippocampus
nTPM: 47.5
1911 Female, age 85, right hemisphere 55.9
2148 Female, age 91, left hemisphere 53.2
2529 Female, age 94, left hemisphere 52.8
1898 Male, age 80, left hemisphere 45.9
1855 Male, age 76, left hemisphere 41.4
2621 Female, age 67, right hemisphere 35.8
Dentate gyrus
nTPM: 41.6
2246 Female, age 85, both hemispheres 49.9
2010 Male, age 76, both hemispheres 49.7
1927 Female, age 91, both hemispheres 43.6
2528 Male, age 74, both hemispheres 43.4
2530 Female, age 94, left hemisphere 32.8
2531 Female, age 67, both hemispheres 30.3
Entorhinal gyrus
nTPM: 37.6
2117 Female, age 91, right hemisphere 55.7
1938 Female, age 85, left hemisphere 53.7
2686 Male, age 75, right hemisphere 43.0
1787 Male, age 76, left hemisphere 30.3
2764 Male, age 80, right hemisphere 27.1
2613 Female, age 94, left hemisphere 15.7
Hippocampus, CA1
nTPM: 44.3
1873 Female, age 85, both hemispheres 60.2
2527 Male, age 74, both hemispheres 57.6
2082 Female, age 91, right hemisphere 41.7
2045 Male, age 76, both hemispheres 38.7
2749 Male, age 80, left hemisphere 23.6
Hippocampus, CA2
nTPM: 39.5
2249 Male, age 74, both hemispheres 53.2
2113 Female, age 91, right hemisphere 50.4
1963 Male, age 80, left hemisphere 39.2
1940 Female, age 85, left hemisphere 35.3
1892 Male, age 76, both hemispheres 30.6
2437 Female, age 94, left hemisphere 28.4
Hippocampus, CA3
nTPM: 33.3
1891 Female, age 85, both hemispheres 56.2
1867 Male, age 76, both hemispheres 34.1
2620 Female, age 94, left hemisphere 30.1
2436 Male, age 74, both hemispheres 28.9
2861 Female, age 67, both hemispheres 27.6
2137 Male, age 80, left hemisphere 23.1
Parahippocampal cortex
nTPM: 39.1
2692 Male, age 74, both hemispheres 52.5
1933 Female, age 85, both hemispheres 44.6
1850 Male, age 80, both hemispheres 41.8
1990 Female, age 91, right hemisphere 41.1
2245 Female, age 91, both hemispheres 40.6
2622 Female, age 67, right hemisphere 40.0
2250 Female, age 67, right hemisphere 37.1
2532 Female, age 72, left hemisphere 33.1
2018 Male, age 76, both hemispheres 32.8
2693 Female, age 94, both hemispheres 27.6
Perirhinal gyrus
nTPM: 34.5
1841 Female, age 85, right hemisphere 40.1
1847 Female, age 91, left hemisphere 39.1
1794 Male, age 80, right hemisphere 32.6
2848 Male, age 76, right hemisphere 30.5
2521 Female, age 94, right hemisphere 30.3
Subiculum
nTPM: 42.5
2729 Female, age 91, right hemisphere 55.0
2619 Male, age 74, both hemispheres 47.5
2438 Female, age 94, left hemisphere 40.5
1977 Female, age 85, both hemispheres 38.6
1901 Male, age 80, both hemispheres 37.9
2042 Male, age 76, both hemispheres 35.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 28.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 28.7
Samples: 197

Max nTPM: 58.8
Min nTPM: 12.0
Std nTPM: 8.4
Median nTPM: 27.7
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 58.8
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 58.1
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 56.1
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 53.1
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 51.7
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 48.9
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 48.8
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 46.8
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 46.3
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 44.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 44.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 58.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 58.3
FF:10153-102I9 76 years, female 66.5
FF:10169-103B7 60 years, female 50.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 80.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 80.7
Samples: 4

Max nTPM: 95.0
Min nTPM: 64.8
Sample A Female 95.0
Sample B Female 75.3
Sample C Male 87.5
Sample D Male 64.8
Entorhinal cortex
nTPM: 78.9
Samples: 4

Max nTPM: 88.4
Min nTPM: 67.7
Sample A Female 81.9
Sample B Female 88.4
Sample C Male 77.4
Sample D Male 67.7
Subiculum
nTPM: 74.0
Samples: 4

Max nTPM: 90.2
Min nTPM: 61.0
Sample A Female 90.2
Sample B Female 67.0
Sample C Male 61.0
Sample D Male 77.9
Ventral hippocampus
nTPM: 70.1
Samples: 4

Max nTPM: 86.0
Min nTPM: 51.0
Sample A Female 86.0
Sample B Female 71.9
Sample C Male 51.0
Sample D Male 71.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 78.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 78.3
Samples: 4

Max nTPM: 89.1
Min nTPM: 68.7
Sample A Male 89.1
Sample B Male 83.5
Sample C Female 71.8
Sample D Female 68.7
Hippocampal formation
nTPM: 72.8
Samples: 4

Max nTPM: 80.1
Min nTPM: 66.7
Sample A Male 80.1
Sample B Male 76.2
Sample C Female 66.7
Sample D Female 68.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.2
113 Antisense, RP_Baylor_102635, Mouse strain C57BL/6J (56 days, male) 2.5
114 Antisense, RP_Baylor_102635, Mouse strain C57BL/6J (56 days, male) 0.1
115 Sense, RPS_Baylor_36953, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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