HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:25.7 nTPM
HPA:25.7 nTPM
GTEx:57.3 nTPM
FANTOM5:28.4 Scaled Tags Per Million
Pig:18.5 nTPM
Mouse:59.3 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 25.7
Sample id Sample description nTPM
Hippocampus
nTPM: 25.7
1898 Male, age 80, left hemisphere 26.2
2621 Female, age 67, right hemisphere 26.2
2529 Female, age 94, left hemisphere 26.0
1855 Male, age 76, left hemisphere 25.6
2148 Female, age 91, left hemisphere 25.3
1911 Female, age 85, right hemisphere 25.1
Dentate gyrus
nTPM: 25.4
2530 Female, age 94, left hemisphere 26.1
2010 Male, age 76, both hemispheres 25.7
1927 Female, age 91, both hemispheres 25.5
2528 Male, age 74, both hemispheres 25.5
2246 Female, age 85, both hemispheres 25.1
2531 Female, age 67, both hemispheres 24.5
Entorhinal gyrus
nTPM: 25.0
1787 Male, age 76, left hemisphere 25.6
2686 Male, age 75, right hemisphere 25.3
2117 Female, age 91, right hemisphere 25.2
2764 Male, age 80, right hemisphere 25.0
1938 Female, age 85, left hemisphere 24.6
2613 Female, age 94, left hemisphere 24.6
Hippocampus, CA1
nTPM: 25.3
2045 Male, age 76, both hemispheres 26.5
1873 Female, age 85, both hemispheres 25.5
2082 Female, age 91, right hemisphere 25.3
2527 Male, age 74, both hemispheres 25.1
2749 Male, age 80, left hemisphere 24.1
Hippocampus, CA2
nTPM: 25.6
2249 Male, age 74, both hemispheres 26.6
1940 Female, age 85, left hemisphere 26.0
2113 Female, age 91, right hemisphere 25.7
1963 Male, age 80, left hemisphere 25.6
1892 Male, age 76, both hemispheres 25.3
2437 Female, age 94, left hemisphere 24.6
Hippocampus, CA3
nTPM: 25.3
2436 Male, age 74, both hemispheres 26.5
1867 Male, age 76, both hemispheres 25.8
2620 Female, age 94, left hemisphere 25.4
1891 Female, age 85, both hemispheres 25.0
2861 Female, age 67, both hemispheres 24.9
2137 Male, age 80, left hemisphere 24.5
Parahippocampal cortex
nTPM: 25.6
2018 Male, age 76, both hemispheres 26.4
2245 Female, age 91, both hemispheres 26.0
2250 Female, age 67, right hemisphere 25.9
1933 Female, age 85, both hemispheres 25.7
2693 Female, age 94, both hemispheres 25.6
1990 Female, age 91, right hemisphere 25.4
2622 Female, age 67, right hemisphere 25.4
1850 Male, age 80, both hemispheres 25.1
2532 Female, age 72, left hemisphere 25.1
2692 Male, age 74, both hemispheres 25.1
Perirhinal gyrus
nTPM: 25.5
2848 Male, age 76, right hemisphere 25.8
1847 Female, age 91, left hemisphere 25.7
1841 Female, age 85, right hemisphere 25.5
1794 Male, age 80, right hemisphere 25.4
2521 Female, age 94, right hemisphere 25.2
Subiculum
nTPM: 25.3
2042 Male, age 76, both hemispheres 26.1
2729 Female, age 91, right hemisphere 25.7
2438 Female, age 94, left hemisphere 25.2
2619 Male, age 74, both hemispheres 25.2
1901 Male, age 80, both hemispheres 25.1
1977 Female, age 85, both hemispheres 24.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 57.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 57.3
Samples: 197

Max nTPM: 273.5
Min nTPM: 27.1
Std nTPM: 22.8
Median nTPM: 53.4
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 273.5
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 158.1
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 119.4
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 101.0
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 99.2
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 94.7
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 93.4
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 89.6
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 88.7
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 88.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 86.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 28.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 28.4
FF:10169-103B7 60 years, female 29.2
FF:10153-102I9 76 years, female 27.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 15.6
Samples: 4

Max nTPM: 19.7
Min nTPM: 12.0
Sample A Female 19.7
Sample B Female 14.4
Sample C Male 16.4
Sample D Male 12.0
Entorhinal cortex
nTPM: 18.3
Samples: 4

Max nTPM: 21.5
Min nTPM: 11.9
Sample A Female 20.4
Sample B Female 21.5
Sample C Male 19.2
Sample D Male 11.9
Subiculum
nTPM: 17.7
Samples: 4

Max nTPM: 24.8
Min nTPM: 14.5
Sample A Female 24.8
Sample B Female 14.5
Sample C Male 16.5
Sample D Male 15.1
Ventral hippocampus
nTPM: 18.5
Samples: 4

Max nTPM: 22.4
Min nTPM: 13.9
Sample A Female 22.4
Sample B Female 15.8
Sample C Male 21.9
Sample D Male 13.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 59.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 59.1
Samples: 4

Max nTPM: 63.0
Min nTPM: 56.8
Sample A Male 56.8
Sample B Male 57.1
Sample C Female 63.0
Sample D Female 59.3
Hippocampal formation
nTPM: 59.3
Samples: 4

Max nTPM: 69.1
Min nTPM: 50.7
Sample A Male 69.1
Sample B Male 50.7
Sample C Female 57.6
Sample D Female 59.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
70539164 Antisense, RP_050324_02_A11, Mouse strain C57BL/6J (56 days, male) 1.2
75990413 Antisense, RP_060608_01_A05, Mouse strain C57BL/6J (56 days, male) 0.4
74800893 Antisense, RP_060315_02_A03, Mouse strain C57BL/6J (56 days, male) 0.3

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The Human Protein Atlas

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