COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:104.6 nTPM
HPA:72.2 nTPM
GTEx:104.6 nTPM
FANTOM5:160.5 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 72.2
overview
Male, age 54 		Colon sample 67
nTPM: 56.9
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 51
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 76.7
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 74.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 116.6
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 73.5
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 121
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 56.2
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 83.5
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 71.7
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 60
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 47.1
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 49.4
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 104.6
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 66.3
Samples: 373

Max nTPM: 204.7
Min nTPM: 34.9
Std nTPM: 23.2
Median nTPM: 61.0
GTEX-15RJ7-1726-SM-6PAL3 40-49 years, male 204.7
GTEX-ZYFD-2226-SM-5E43P 50-59 years, male 204.6
GTEX-13W3W-2226-SM-5LU4M 60-69 years, female 179.5
GTEX-1K9T9-2926-SM-E9TKD 50-59 years, female 164.5
GTEX-15ER7-2826-SM-6PAN2 20-29 years, female 161.1
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 156.7
GTEX-17EUY-1726-SM-79OK4 20-29 years, male 151.9
GTEX-Y8LW-1126-SM-4VDS4 50-59 years, female 133.7
GTEX-Y8E4-2326-SM-EAZAZ 40-49 years, male 132.5
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 131.7
GTEX-W5WG-2026-SM-4LMIB 50-59 years, female 123.8
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Colon - Transverse
Average nTPM: 104.6
Samples: 406

Max nTPM: 535.7
Min nTPM: 34.6
Std nTPM: 54.2
Median nTPM: 89.5
GTEX-1K9T9-2826-SM-D4P3F 50-59 years, female 535.7
GTEX-OOBJ-1426-SM-E6CHH 60-69 years, male 363.7
GTEX-SNOS-1226-SM-4DM5H 40-49 years, male 356.4
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 294.8
GTEX-1IKOE-2026-SM-AHZ31 30-39 years, female 286.1
GTEX-ZVP2-1526-SM-5NQ82 50-59 years, male 283.2
GTEX-ZDYS-2326-SM-4WKG6 50-59 years, male 282.5
GTEX-1B8KZ-1326-SM-7DUG6 50-59 years, male 272.1
GTEX-XMK1-1726-SM-4B64Z 40-49 years, male 269.3
GTEX-1NSGN-2326-SM-E9U5X 50-59 years, male 249.9
GTEX-Q2AH-1226-SM-48TZL 40-49 years, male 246.6
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 160.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 160.5
FF:10014-101C5 62,83,84 years, mixed 160.5

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.