COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Medium
Glandular cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:71.9 nTPM
HPA:5.6 nTPM
GTEx:71.9 nTPM
FANTOM5:7.2 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA031641Antibody CAB032859
Endothelial cells LowHigh
Glandular cells MediumMedium





COLON - HPA RNA-seqi
Average nTPM 5.6
overview
Male, age 54 		Colon sample 67
nTPM: 5.2
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 3.8
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 3.1
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 5.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 4.3
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 13.2
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 3.7
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 3.7
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 7.2
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 2.1
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 4.9
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 5
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 11.5
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 71.9
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 71.9
Samples: 373

Max nTPM: 166.4
Min nTPM: 12.4
Std nTPM: 23.4
Median nTPM: 69.2
GTEX-ZVT4-2626-SM-5N9GJ 50-59 years, female 166.4
GTEX-1GMRU-2626-SM-9WPPM 50-59 years, male 144.1
GTEX-ZYY3-2226-SM-5E45A 60-69 years, female 141.4
GTEX-1JN6P-2126-SM-ARL98 60-69 years, male 139.5
GTEX-1LKK1-2426-SM-DIPES 50-59 years, female 133.0
GTEX-1RAZQ-2026-SM-E76P7 30-39 years, male 131.7
GTEX-15UF6-2726-SM-7KULY 70-79 years, female 129.3
GTEX-13OW5-2826-SM-5KM1G 60-69 years, male 129.2
GTEX-11ZTS-1526-SM-5N9G7 60-69 years, female 128.4
GTEX-1RDX4-1926-SM-E6CJJ 50-59 years, female 127.2
GTEX-1A32A-2626-SM-73KX9 50-59 years, female 123.9
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Colon - Transverse
Average nTPM: 41.6
Samples: 406

Max nTPM: 136.4
Min nTPM: 8.1
Std nTPM: 24.3
Median nTPM: 36.3
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 136.4
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 133.7
GTEX-145MO-2426-SM-5NQ9W 60-69 years, male 115.6
GTEX-1JMLX-2726-SM-CM2SB 50-59 years, male 111.5
GTEX-1LG7Y-2126-SM-DIPER 50-59 years, male 103.9
GTEX-13OW5-2626-SM-5MR3M 60-69 years, male 100.2
GTEX-11GSP-1626-SM-5986N 60-69 years, female 100.0
GTEX-13O3P-2326-SM-5KM55 50-59 years, male 94.4
GTEX-17HII-2726-SM-7MGVM 50-59 years, male 93.1
GTEX-XXEK-1926-SM-4BRVD 50-59 years, male 91.9
GTEX-V955-1626-SM-4JBHJ 60-69 years, male 91.3
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 7.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 7.2
FF:10014-101C5 62,83,84 years, mixed 7.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.