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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:97.9 nTPM
FANTOM5:116.8 Scaled Tags Per Million
Pig:81.4 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody CAB032873
Glial cells Not detected
Neuronal cells Medium



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 97.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 97.9
Samples: 246

Max nTPM: 389.5
Min nTPM: 12.2
Std nTPM: 55.4
Median nTPM: 87.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 389.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 356.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 280.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 280.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 278.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 270.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 266.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 252.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 251.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 235.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 227.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 226.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 216.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 214.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 199.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 191.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 189.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 184.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 182.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 181.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 176.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 170.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 163.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 162.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 154.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 154.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 153.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 152.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 151.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 151.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 150.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 147.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 144.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 143.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 142.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 139.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 139.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 137.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 135.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 134.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 134.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 133.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 133.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 126.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 125.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 125.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 124.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 123.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 122.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 122.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 121.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 121.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 120.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 120.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 119.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 118.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 117.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 117.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 116.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 115.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 114.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 113.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 112.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 112.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 111.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 110.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 110.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 108.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 108.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 108.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 107.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 107.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 106.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 106.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 106.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 105.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 105.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 103.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 103.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 102.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 102.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 102.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 102.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 101.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 101.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 101.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 100.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 100.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 100.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 99.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 98.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 97.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 96.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 96.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 94.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 94.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 94.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 93.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 93.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 93.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 92.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 92.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 92.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 92.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 92.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 92.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 92.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 91.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 91.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 91.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 91.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 91.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 91.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 91.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 90.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 90.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 89.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 89.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 88.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 88.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 88.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 88.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 88.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 87.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 86.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 86.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 86.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 85.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 85.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 85.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 84.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 83.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 83.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 83.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 82.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 82.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 82.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 80.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 80.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 79.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 79.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 77.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 77.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 77.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 77.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 76.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 76.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 75.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 75.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 75.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 75.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 74.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 73.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 73.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 72.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 72.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 71.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 70.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 70.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 70.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 70.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 69.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 69.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 69.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 69.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 68.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 67.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 67.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 67.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 67.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 67.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 66.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 65.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 64.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 64.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 63.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 63.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 63.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 62.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 62.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 62.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 62.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 62.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 62.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 62.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 62.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 61.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 61.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 61.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 61.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 61.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 61.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 60.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 59.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 59.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 58.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 58.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 58.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 58.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 58.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 58.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 56.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 55.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 55.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 54.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 54.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 54.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 54.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 53.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 53.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 52.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 52.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 51.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 51.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 50.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 50.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 48.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 48.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 48.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 46.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 46.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 45.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 45.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 44.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 44.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 44.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 44.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 43.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 43.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 43.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 43.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 42.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 41.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 41.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 40.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 40.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 39.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 39.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 38.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 34.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 32.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 31.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 30.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 30.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 19.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 12.2
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 116.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 116.8
FF:10164-103B2 76 years, female 116.8

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 81.4
Pig sample Sample description nTPM
Caudate
nTPM: 81.4
Samples: 4

Max nTPM: 93.0
Min nTPM: 67.7
Sample A Female 75.7
Sample B Female 89.2
Sample C Male 93.0
Sample D Male 67.7

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