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PSMA7
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  • PSMA7
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:118.7 nTPM
FANTOM5:87.3 Scaled Tags Per Million
Pig:104.3 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA047266Antibody CAB046007Antibody CAB046008
Glial cells Not detectedNot detectedLow
Neuronal cells LowLowMedium







CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 118.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 118.7
Samples: 246

Max nTPM: 219.7
Min nTPM: 80.0
Std nTPM: 23.6
Median nTPM: 115.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 219.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 215.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 197.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 196.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 193.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 185.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 180.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 171.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 169.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 166.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 166.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 165.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 164.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 164.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 160.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 159.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 159.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 159.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 156.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 155.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 152.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 151.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 150.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 149.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 148.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 148.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 146.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 144.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 144.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 143.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 141.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 140.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 140.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 140.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 139.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 138.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 138.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 138.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 138.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 136.9
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 136.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 136.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 136.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 135.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 135.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 134.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 134.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 133.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 133.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 133.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 133.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 132.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 130.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 130.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 130.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 130.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 130.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 130.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 130.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 130.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 129.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 129.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 128.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 128.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 128.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 128.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 128.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 127.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 127.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 126.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 126.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 126.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 126.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 126.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 126.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 125.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 125.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 125.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 125.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 124.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 124.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 124.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 123.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 123.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 123.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 123.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 123.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 123.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 122.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 122.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 122.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 122.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 121.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 121.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 120.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 120.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 120.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 120.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 120.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 119.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 118.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 118.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 118.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 118.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 118.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 117.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 117.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 117.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 117.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 117.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 117.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 117.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 117.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 117.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 116.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 116.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 116.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 116.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 116.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 116.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 116.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 115.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 115.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 115.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 114.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 114.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 114.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 114.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 114.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 114.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 114.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 113.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 113.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 113.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 113.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 112.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 112.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 112.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 111.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 111.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 111.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 111.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 111.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 111.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 110.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 110.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 110.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 110.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 110.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 110.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 110.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 110.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 109.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 109.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 109.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 109.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 109.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 108.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 108.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 108.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 108.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 107.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 107.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 107.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 107.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 106.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 106.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 106.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 105.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 105.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 105.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 105.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 104.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 104.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 104.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 104.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 103.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 103.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 103.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 103.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 103.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 102.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 102.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 102.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 102.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 102.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 102.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 102.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 101.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 101.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 101.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 101.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 100.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 100.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 100.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 100.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 100.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 99.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 99.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 98.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 98.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 97.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 97.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 96.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 95.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 95.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 95.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 95.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 95.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 94.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 94.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 94.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 94.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 94.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 94.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 94.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 94.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 93.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 93.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 93.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 92.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 92.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 92.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 92.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 90.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 90.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 90.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 90.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 90.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 90.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 90.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 89.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 89.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 89.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 88.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 88.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 88.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 88.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 85.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 85.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 85.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 85.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 84.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 82.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 80.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 80.0
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 87.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 87.3
FF:10164-103B2 76 years, female 87.3

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 104.3
Pig sample Sample description nTPM
Caudate
nTPM: 104.3
Samples: 4

Max nTPM: 123.2
Min nTPM: 91.9
Sample A Female 102.2
Sample B Female 100.0
Sample C Male 123.2
Sample D Male 91.9

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