HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:15.4 nTPM
HPA:15.4 nTPM
GTEx:17.5 nTPM
FANTOM5:43.3 Scaled Tags Per Million
Pig:6.5 nTPM
Mouse:13.6 nTPM
Allen mouse:9.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA049904Antibody CAB004374
Glial cells HighNot detected
Neuronal cells MediumNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.4
Sample id Sample description nTPM
Hippocampus
nTPM: 15.1
2148 Female, age 91, left hemisphere 16.8
2529 Female, age 94, left hemisphere 16.2
2621 Female, age 67, right hemisphere 16.0
1911 Female, age 85, right hemisphere 15.0
1855 Male, age 76, left hemisphere 13.8
1898 Male, age 80, left hemisphere 12.6
Dentate gyrus
nTPM: 14.7
2531 Female, age 67, both hemispheres 16.3
2246 Female, age 85, both hemispheres 16.2
2530 Female, age 94, left hemisphere 14.6
2528 Male, age 74, both hemispheres 14.5
1927 Female, age 91, both hemispheres 13.6
2010 Male, age 76, both hemispheres 12.9
Entorhinal gyrus
nTPM: 15.1
2686 Male, age 75, right hemisphere 16.4
2764 Male, age 80, right hemisphere 15.7
2613 Female, age 94, left hemisphere 15.2
1787 Male, age 76, left hemisphere 14.9
2117 Female, age 91, right hemisphere 14.9
1938 Female, age 85, left hemisphere 13.6
Hippocampus, CA1
nTPM: 14.8
2082 Female, age 91, right hemisphere 16.1
2527 Male, age 74, both hemispheres 14.9
1873 Female, age 85, both hemispheres 14.6
2045 Male, age 76, both hemispheres 14.4
2749 Male, age 80, left hemisphere 14.2
Hippocampus, CA2
nTPM: 14.3
2113 Female, age 91, right hemisphere 15.9
1940 Female, age 85, left hemisphere 15.7
2437 Female, age 94, left hemisphere 15.0
1963 Male, age 80, left hemisphere 13.8
2249 Male, age 74, both hemispheres 13.7
1892 Male, age 76, both hemispheres 11.3
Hippocampus, CA3
nTPM: 15.4
2620 Female, age 94, left hemisphere 18.2
2861 Female, age 67, both hemispheres 15.9
1891 Female, age 85, both hemispheres 15.5
2137 Male, age 80, left hemisphere 15.4
2436 Male, age 74, both hemispheres 15.2
1867 Male, age 76, both hemispheres 12.2
Parahippocampal cortex
nTPM: 15.0
2532 Female, age 72, left hemisphere 16.8
2622 Female, age 67, right hemisphere 16.4
2692 Male, age 74, both hemispheres 15.6
2018 Male, age 76, both hemispheres 15.5
2245 Female, age 91, both hemispheres 15.1
1990 Female, age 91, right hemisphere 15.0
2693 Female, age 94, both hemispheres 14.3
1850 Male, age 80, both hemispheres 13.9
2250 Female, age 67, right hemisphere 13.8
1933 Female, age 85, both hemispheres 13.6
Perirhinal gyrus
nTPM: 14.0
2848 Male, age 76, right hemisphere 14.8
1794 Male, age 80, right hemisphere 14.3
1841 Female, age 85, right hemisphere 14.0
2521 Female, age 94, right hemisphere 13.8
1847 Female, age 91, left hemisphere 12.8
Subiculum
nTPM: 15.3
2042 Male, age 76, both hemispheres 16.0
2729 Female, age 91, right hemisphere 15.8
2619 Male, age 74, both hemispheres 15.6
2438 Female, age 94, left hemisphere 15.3
1977 Female, age 85, both hemispheres 14.9
1901 Male, age 80, both hemispheres 14.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 17.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.5
Samples: 197

Max nTPM: 29.9
Min nTPM: 10.1
Std nTPM: 3.4
Median nTPM: 17.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 29.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 29.0
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 27.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 26.9
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 26.7
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 25.8
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 25.1
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 24.5
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 24.4
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 23.9
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 23.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 43.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 43.3
FF:10153-102I9 76 years, female 49.0
FF:10169-103B7 60 years, female 37.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 6.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 5.8
Samples: 4

Max nTPM: 6.0
Min nTPM: 5.3
Sample A Female 6.0
Sample B Female 5.9
Sample C Male 5.9
Sample D Male 5.3
Entorhinal cortex
nTPM: 6.3
Samples: 4

Max nTPM: 6.8
Min nTPM: 5.7
Sample A Female 6.5
Sample B Female 5.7
Sample C Male 6.8
Sample D Male 6.3
Subiculum
nTPM: 6.5
Samples: 4

Max nTPM: 7.6
Min nTPM: 5.8
Sample A Female 7.6
Sample B Female 5.8
Sample C Male 6.7
Sample D Male 5.8
Ventral hippocampus
nTPM: 6.4
Samples: 4

Max nTPM: 7.8
Min nTPM: 5.6
Sample A Female 5.8
Sample B Female 5.6
Sample C Male 7.8
Sample D Male 6.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 13.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 13.4
Samples: 4

Max nTPM: 14.2
Min nTPM: 12.5
Sample A Male 12.5
Sample B Male 13.5
Sample C Female 13.3
Sample D Female 14.2
Hippocampal formation
nTPM: 13.6
Samples: 4

Max nTPM: 14.9
Min nTPM: 13.0
Sample A Male 13.0
Sample B Male 14.9
Sample C Female 13.4
Sample D Female 13.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.0
69262318 Antisense, RP_050303_01_H10, Mouse strain C57BL/6J (56 days, male) 9.0

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