HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:10.7 nTPM
HPA:10.7 nTPM
GTEx:10.5 nTPM
FANTOM5:26.6 Scaled Tags Per Million
Mouse:14.4 nTPM
Allen mouse:4.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA011900
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 10.7
Sample id Sample description nTPM
Hippocampus
nTPM: 9.5
1898 Male, age 80, left hemisphere 11.8
1855 Male, age 76, left hemisphere 11.1
2621 Female, age 67, right hemisphere 10.0
1911 Female, age 85, right hemisphere 9.1
2148 Female, age 91, left hemisphere 9.0
2529 Female, age 94, left hemisphere 5.9
Dentate gyrus
nTPM: 9.0
2010 Male, age 76, both hemispheres 10.0
2246 Female, age 85, both hemispheres 10.0
2531 Female, age 67, both hemispheres 9.1
1927 Female, age 91, both hemispheres 8.3
2530 Female, age 94, left hemisphere 8.3
2528 Male, age 74, both hemispheres 8.2
Entorhinal gyrus
nTPM: 8.5
2613 Female, age 94, left hemisphere 11.4
2764 Male, age 80, right hemisphere 9.6
1938 Female, age 85, left hemisphere 8.4
1787 Male, age 76, left hemisphere 7.6
2686 Male, age 75, right hemisphere 7.5
2117 Female, age 91, right hemisphere 6.5
Hippocampus, CA1
nTPM: 10.7
2749 Male, age 80, left hemisphere 16.4
1873 Female, age 85, both hemispheres 11.0
2527 Male, age 74, both hemispheres 10.3
2045 Male, age 76, both hemispheres 8.8
2082 Female, age 91, right hemisphere 7.0
Hippocampus, CA2
nTPM: 8.9
1963 Male, age 80, left hemisphere 13.1
1892 Male, age 76, both hemispheres 10.0
2113 Female, age 91, right hemisphere 7.8
1940 Female, age 85, left hemisphere 7.7
2437 Female, age 94, left hemisphere 7.6
2249 Male, age 74, both hemispheres 7.1
Hippocampus, CA3
nTPM: 9.5
2137 Male, age 80, left hemisphere 15.1
2861 Female, age 67, both hemispheres 11.7
2620 Female, age 94, left hemisphere 8.8
1867 Male, age 76, both hemispheres 7.4
1891 Female, age 85, both hemispheres 7.3
2436 Male, age 74, both hemispheres 6.5
Parahippocampal cortex
nTPM: 9.1
2693 Female, age 94, both hemispheres 10.9
1933 Female, age 85, both hemispheres 10.2
2532 Female, age 72, left hemisphere 9.9
2250 Female, age 67, right hemisphere 9.7
2245 Female, age 91, both hemispheres 9.3
2622 Female, age 67, right hemisphere 9.2
1850 Male, age 80, both hemispheres 8.8
2018 Male, age 76, both hemispheres 8.3
2692 Male, age 74, both hemispheres 7.5
1990 Female, age 91, right hemisphere 7.3
Perirhinal gyrus
nTPM: 10.7
2521 Female, age 94, right hemisphere 13.0
1841 Female, age 85, right hemisphere 11.4
1847 Female, age 91, left hemisphere 10.7
1794 Male, age 80, right hemisphere 10.0
2848 Male, age 76, right hemisphere 8.4
Subiculum
nTPM: 7.1
1977 Female, age 85, both hemispheres 8.6
1901 Male, age 80, both hemispheres 7.9
2729 Female, age 91, right hemisphere 7.9
2619 Male, age 74, both hemispheres 7.2
2042 Male, age 76, both hemispheres 5.4
2438 Female, age 94, left hemisphere 5.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.5
Samples: 197

Max nTPM: 22.5
Min nTPM: 4.2
Std nTPM: 3.2
Median nTPM: 10.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 22.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 19.5
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 19.1
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 18.0
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 16.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 16.5
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 16.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 16.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 16.3
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 16.2
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 16.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 26.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 26.6
FF:10153-102I9 76 years, female 29.2
FF:10169-103B7 60 years, female 24.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 14.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 14.4
Samples: 4

Max nTPM: 16.0
Min nTPM: 12.4
Sample A Male 14.5
Sample B Male 14.8
Sample C Female 12.4
Sample D Female 16.0
Hippocampal formation
nTPM: 12.5
Samples: 4

Max nTPM: 14.1
Min nTPM: 10.3
Sample A Male 12.1
Sample B Male 14.1
Sample C Female 13.6
Sample D Female 10.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.8
71570741 Antisense, RP_050510_04_F11, Mouse strain C57BL/6J (56 days, male) 4.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.