HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:17.6 nTPM
HPA:17.6 nTPM
GTEx:11.8 nTPM
FANTOM5:58.3 Scaled Tags Per Million
Pig:26.1 nTPM
Mouse:46.1 nTPM
Allen mouse:1.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA064099
Glial cells Medium
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.6
Sample id Sample description nTPM
Hippocampus
nTPM: 15.2
1855 Male, age 76, left hemisphere 16.5
1898 Male, age 80, left hemisphere 15.7
2621 Female, age 67, right hemisphere 15.6
2148 Female, age 91, left hemisphere 15.1
2529 Female, age 94, left hemisphere 14.9
1911 Female, age 85, right hemisphere 13.1
Dentate gyrus
nTPM: 15.0
1927 Female, age 91, both hemispheres 15.5
2530 Female, age 94, left hemisphere 15.3
2246 Female, age 85, both hemispheres 15.1
2531 Female, age 67, both hemispheres 15.1
2528 Male, age 74, both hemispheres 14.5
2010 Male, age 76, both hemispheres 14.4
Entorhinal gyrus
nTPM: 16.3
2613 Female, age 94, left hemisphere 18.4
1787 Male, age 76, left hemisphere 17.1
1938 Female, age 85, left hemisphere 16.9
2764 Male, age 80, right hemisphere 16.2
2686 Male, age 75, right hemisphere 15.4
2117 Female, age 91, right hemisphere 13.9
Hippocampus, CA1
nTPM: 15.4
2749 Male, age 80, left hemisphere 17.4
1873 Female, age 85, both hemispheres 15.2
2045 Male, age 76, both hemispheres 15.2
2527 Male, age 74, both hemispheres 14.9
2082 Female, age 91, right hemisphere 14.5
Hippocampus, CA2
nTPM: 14.9
1892 Male, age 76, both hemispheres 17.8
2437 Female, age 94, left hemisphere 15.6
1940 Female, age 85, left hemisphere 14.3
2113 Female, age 91, right hemisphere 14.2
1963 Male, age 80, left hemisphere 14.1
2249 Male, age 74, both hemispheres 13.7
Hippocampus, CA3
nTPM: 16.1
2620 Female, age 94, left hemisphere 19.0
2436 Male, age 74, both hemispheres 17.2
2137 Male, age 80, left hemisphere 16.3
2861 Female, age 67, both hemispheres 16.0
1867 Male, age 76, both hemispheres 14.6
1891 Female, age 85, both hemispheres 13.7
Parahippocampal cortex
nTPM: 15.9
2622 Female, age 67, right hemisphere 17.1
1850 Male, age 80, both hemispheres 17.0
2693 Female, age 94, both hemispheres 16.8
2250 Female, age 67, right hemisphere 16.4
2532 Female, age 72, left hemisphere 16.4
1933 Female, age 85, both hemispheres 16.0
2245 Female, age 91, both hemispheres 15.6
1990 Female, age 91, right hemisphere 15.0
2692 Male, age 74, both hemispheres 14.9
2018 Male, age 76, both hemispheres 13.4
Perirhinal gyrus
nTPM: 17.6
1794 Male, age 80, right hemisphere 18.9
1847 Female, age 91, left hemisphere 18.0
1841 Female, age 85, right hemisphere 17.6
2521 Female, age 94, right hemisphere 17.5
2848 Male, age 76, right hemisphere 16.1
Subiculum
nTPM: 15.2
2619 Male, age 74, both hemispheres 17.4
2438 Female, age 94, left hemisphere 16.2
1977 Female, age 85, both hemispheres 15.9
1901 Male, age 80, both hemispheres 14.8
2729 Female, age 91, right hemisphere 14.0
2042 Male, age 76, both hemispheres 13.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.8
Samples: 197

Max nTPM: 22.9
Min nTPM: 1.5
Std nTPM: 3.8
Median nTPM: 11.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 22.9
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 22.1
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 21.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 21.1
GTEX-1IDJH-0011-R1b-SM-ARU6U 70-79 years, male 20.9
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 20.5
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 20.3
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 20.2
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 20.0
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 19.8
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 19.7
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 58.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 58.3
FF:10169-103B7 60 years, female 69.0
FF:10153-102I9 76 years, female 47.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 26.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 25.7
Samples: 4

Max nTPM: 29.3
Min nTPM: 20.7
Sample A Female 29.3
Sample B Female 28.0
Sample C Male 24.8
Sample D Male 20.7
Entorhinal cortex
nTPM: 25.4
Samples: 4

Max nTPM: 29.3
Min nTPM: 23.2
Sample A Female 29.3
Sample B Female 23.2
Sample C Male 25.6
Sample D Male 23.5
Subiculum
nTPM: 25.5
Samples: 4

Max nTPM: 31.2
Min nTPM: 22.2
Sample A Female 31.2
Sample B Female 22.4
Sample C Male 26.0
Sample D Male 22.2
Ventral hippocampus
nTPM: 26.1
Samples: 4

Max nTPM: 34.3
Min nTPM: 19.2
Sample A Female 24.5
Sample B Female 19.2
Sample C Male 34.3
Sample D Male 26.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 46.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 46.1
Samples: 4

Max nTPM: 59.2
Min nTPM: 40.9
Sample A Male 43.5
Sample B Male 40.9
Sample C Female 40.9
Sample D Female 59.2
Hippocampal formation
nTPM: 35.7
Samples: 4

Max nTPM: 37.7
Min nTPM: 32.8
Sample A Male 32.8
Sample B Male 35.1
Sample C Female 37.7
Sample D Female 37.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.8
69169361 Antisense, RP_050321_03_D07, Mouse strain C57BL/6J (56 days, male) 1.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.