HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:70.0 nTPM
HPA:70.0 nTPM
GTEx:62.5 nTPM
FANTOM5:16.4 Scaled Tags Per Million
Pig:24.1 nTPM
Mouse:75.4 nTPM
Allen mouse:2.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA052348
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 70.0
Sample id Sample description nTPM
Hippocampus
nTPM: 69.0
1898 Male, age 80, left hemisphere 74.2
1855 Male, age 76, left hemisphere 70.9
2621 Female, age 67, right hemisphere 68.7
2148 Female, age 91, left hemisphere 67.4
2529 Female, age 94, left hemisphere 67.2
1911 Female, age 85, right hemisphere 65.3
Dentate gyrus
nTPM: 68.2
2530 Female, age 94, left hemisphere 71.6
1927 Female, age 91, both hemispheres 70.4
2010 Male, age 76, both hemispheres 69.6
2246 Female, age 85, both hemispheres 66.5
2528 Male, age 74, both hemispheres 66.4
2531 Female, age 67, both hemispheres 64.6
Entorhinal gyrus
nTPM: 67.1
2764 Male, age 80, right hemisphere 69.7
2613 Female, age 94, left hemisphere 67.9
1787 Male, age 76, left hemisphere 67.3
1938 Female, age 85, left hemisphere 67.3
2686 Male, age 75, right hemisphere 65.9
2117 Female, age 91, right hemisphere 64.9
Hippocampus, CA1
nTPM: 70.0
2749 Male, age 80, left hemisphere 82.0
2045 Male, age 76, both hemispheres 69.1
1873 Female, age 85, both hemispheres 68.5
2527 Male, age 74, both hemispheres 67.0
2082 Female, age 91, right hemisphere 63.5
Hippocampus, CA2
nTPM: 68.2
1892 Male, age 76, both hemispheres 74.8
1963 Male, age 80, left hemisphere 73.3
2437 Female, age 94, left hemisphere 68.0
2249 Male, age 74, both hemispheres 66.1
2113 Female, age 91, right hemisphere 63.5
1940 Female, age 85, left hemisphere 63.4
Hippocampus, CA3
nTPM: 68.5
1867 Male, age 76, both hemispheres 70.4
2137 Male, age 80, left hemisphere 70.4
2436 Male, age 74, both hemispheres 69.1
2861 Female, age 67, both hemispheres 67.7
2620 Female, age 94, left hemisphere 67.1
1891 Female, age 85, both hemispheres 66.2
Parahippocampal cortex
nTPM: 66.2
1850 Male, age 80, both hemispheres 69.6
1990 Female, age 91, right hemisphere 67.5
2692 Male, age 74, both hemispheres 67.3
2018 Male, age 76, both hemispheres 66.4
2532 Female, age 72, left hemisphere 66.1
1933 Female, age 85, both hemispheres 66.0
2245 Female, age 91, both hemispheres 65.5
2622 Female, age 67, right hemisphere 65.1
2250 Female, age 67, right hemisphere 64.9
2693 Female, age 94, both hemispheres 63.7
Perirhinal gyrus
nTPM: 68.4
1847 Female, age 91, left hemisphere 71.6
1794 Male, age 80, right hemisphere 70.6
1841 Female, age 85, right hemisphere 68.5
2848 Male, age 76, right hemisphere 66.0
2521 Female, age 94, right hemisphere 65.2
Subiculum
nTPM: 65.9
1901 Male, age 80, both hemispheres 69.9
1977 Female, age 85, both hemispheres 67.2
2619 Male, age 74, both hemispheres 66.5
2042 Male, age 76, both hemispheres 64.7
2729 Female, age 91, right hemisphere 64.7
2438 Female, age 94, left hemisphere 62.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 62.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 62.5
Samples: 197

Max nTPM: 133.8
Min nTPM: 34.2
Std nTPM: 15.0
Median nTPM: 61.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 133.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 98.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 96.5
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 96.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 95.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 93.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 93.4
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 92.8
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 92.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 92.3
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 91.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 16.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 16.4
FF:10169-103B7 60 years, female 19.8
FF:10153-102I9 76 years, female 12.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 24.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 23.8
Samples: 4

Max nTPM: 26.7
Min nTPM: 20.3
Sample A Female 26.7
Sample B Female 23.0
Sample C Male 25.3
Sample D Male 20.3
Entorhinal cortex
nTPM: 18.6
Samples: 4

Max nTPM: 20.0
Min nTPM: 17.5
Sample A Female 17.5
Sample B Female 20.0
Sample C Male 18.7
Sample D Male 18.2
Subiculum
nTPM: 21.8
Samples: 4

Max nTPM: 25.1
Min nTPM: 20.1
Sample A Female 25.1
Sample B Female 21.6
Sample C Male 20.4
Sample D Male 20.1
Ventral hippocampus
nTPM: 24.1
Samples: 4

Max nTPM: 30.4
Min nTPM: 18.9
Sample A Female 24.5
Sample B Female 18.9
Sample C Male 30.4
Sample D Male 22.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 75.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 69.2
Samples: 4

Max nTPM: 73.0
Min nTPM: 65.5
Sample A Male 66.8
Sample B Male 71.5
Sample C Female 73.0
Sample D Female 65.5
Hippocampal formation
nTPM: 75.4
Samples: 4

Max nTPM: 78.2
Min nTPM: 70.8
Sample A Male 77.9
Sample B Male 70.8
Sample C Female 74.8
Sample D Female 78.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.4
678686 Antisense, RP_040914_02_D05, Mouse strain C57BL/6J (56 days, male) 2.4

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