COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Medium
Glandular cells: Medium
Peripheral nerve/ganglion: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:69.0 nTPM
HPA:55.3 nTPM
GTEx:69.0 nTPM
FANTOM5:69.6 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA003600Antibody CAB009337
Endothelial cells MediumMedium
Glandular cells MediumHigh
Peripheral nerve/ganglion -Medium




COLON - HPA RNA-seqi
Average nTPM 55.3
overview
Male, age 54 		Colon sample 67
nTPM: 48.7
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 52.3
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 47.5
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 51.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 59.6
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 88.7
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 52.7
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 52.4
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 63.5
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 55.9
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 50.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 50.1
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 44.5
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 69.0
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 69.0
Samples: 373

Max nTPM: 158.5
Min nTPM: 28.4
Std nTPM: 18.7
Median nTPM: 67.8
GTEX-11P7K-1826-SM-5HL5A 30-39 years, male 158.5
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 132.8
GTEX-1I1CD-2826-SM-A9SL4 60-69 years, female 125.7
GTEX-11EM3-1626-SM-5N9CO 20-29 years, female 120.1
GTEX-15RJ7-1726-SM-6PAL3 40-49 years, male 112.3
GTEX-11ZU8-1126-SM-5EQ5K 60-69 years, male 111.9
GTEX-ZYFD-2226-SM-5E43P 50-59 years, male 111.3
GTEX-15RIF-1426-SM-7KUKQ 20-29 years, male 105.1
GTEX-1F5PL-1926-SM-7MXTP 40-49 years, female 103.8
GTEX-1K2DA-1626-SM-CGQGB 50-59 years, male 103.8
GTEX-WFG7-1626-SM-4LVMF 20-29 years, male 103.2
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Colon - Transverse
Average nTPM: 51.4
Samples: 406

Max nTPM: 125.5
Min nTPM: 19.9
Std nTPM: 17.8
Median nTPM: 46.5
GTEX-WEY5-1426-SM-4LMJ3 40-49 years, female 125.5
GTEX-1CB4I-2226-SM-7P8SL 50-59 years, male 120.7
GTEX-13CF3-1426-SM-5K7YY 60-69 years, female 111.2
GTEX-1AX8Z-2726-SM-73KUC 60-69 years, male 105.6
GTEX-18QFQ-1526-SM-72D57 30-39 years, male 105.2
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 102.4
GTEX-Y3I4-1426-SM-4TT9C 50-59 years, male 102.3
GTEX-15DZA-0926-SM-69LQ3 30-39 years, female 101.7
GTEX-1LVAN-2526-SM-CNPPC 50-59 years, female 100.5
GTEX-15CHC-1626-SM-5ZZWS 60-69 years, female 100.4
GTEX-1N2EF-1926-SM-DTX8M 60-69 years, male 99.3
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 69.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 69.6
FF:10014-101C5 62,83,84 years, mixed 69.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.