COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Medium
Glandular cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:23.7 nTPM
HPA:5.3 nTPM
GTEx:23.7 nTPM
FANTOM5:18.1 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA067154Antibody CAB037059
Endothelial cells Not detectedMedium
Glandular cells Not detectedHigh
Peripheral nerve/ganglion Not detected-





COLON - HPA RNA-seqi
Average nTPM 5.3
overview
Male, age 54 		Colon sample 67
nTPM: 5.5
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 5.4
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 2.8
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 5.1
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 9.6
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 2.8
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 3
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 6.6
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 3.5
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 4.5
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 6.3
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 7.3
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 23.7
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 23.7
Samples: 373

Max nTPM: 74.1
Min nTPM: 5.5
Std nTPM: 7.7
Median nTPM: 22.7
GTEX-15RJ7-1726-SM-6PAL3 40-49 years, male 74.1
GTEX-13X6J-2826-SM-7EPGA 50-59 years, male 58.2
GTEX-YEC3-2026-SM-DKPOL 50-59 years, male 44.7
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 44.4
GTEX-1PBJJ-2026-SM-DTX8U 30-39 years, male 44.2
GTEX-Z93S-2626-SM-57WBX 50-59 years, male 43.2
GTEX-1IDJH-2826-SM-CJI49 70-79 years, male 42.7
GTEX-13CF2-1826-SM-5N9GK 60-69 years, male 40.6
GTEX-1GMRU-2626-SM-9WPPM 50-59 years, male 40.5
GTEX-14C5O-2626-SM-5RQI5 60-69 years, male 39.6
GTEX-11EMC-1426-SM-5N9E4 60-69 years, female 39.5
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Colon - Transverse
Average nTPM: 14.0
Samples: 406

Max nTPM: 48.2
Min nTPM: 2.0
Std nTPM: 7.7
Median nTPM: 12.5
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 48.2
GTEX-14C5O-2526-SM-73KU2 60-69 years, male 47.1
GTEX-1GMR2-1726-SM-9JGI2 50-59 years, male 43.0
GTEX-1POEN-2026-SM-E6CRL 30-39 years, female 41.9
GTEX-1LVAN-2526-SM-CNPPC 50-59 years, female 37.6
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 35.4
GTEX-15CHQ-2526-SM-6EU24 60-69 years, male 33.4
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 33.0
GTEX-17F96-2026-SM-79ON4 70-79 years, male 32.9
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 32.7
GTEX-1R9K5-2126-SM-E8VN1 50-59 years, male 30.7
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 18.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 18.1
FF:10014-101C5 62,83,84 years, mixed 18.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.