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CHMP4B
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TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glandular cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:119.9 nTPM
HPA:119.9 nTPM
GTEx:118.8 nTPM
FANTOM5:235.9 Scaled Tags Per Million

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA041401Antibody HPA051751
Glandular cells HighHigh





SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Read more
Average nTPM 119.9
overview
Male, age 65
Small intestine sample 232
nTPM: 107.3
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 153.6
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 101.5
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 117.4

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 118.8
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 118.8
Samples: 187

Max nTPM: 346.2
Min nTPM: 64.9
Std nTPM: 39.5
Median nTPM: 111.4
GTEX-111YS-1426-SM-5GID8 60-69 years, male 346.2
GTEX-YFCO-1326-SM-664NV 40-49 years, male 235.6
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 228.2
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 222.2
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 210.4
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 209.6
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 205.1
GTEX-1122O-1326-SM-5H11F 60-69 years, female 203.0
GTEX-ZTSS-0926-SM-59865 40-49 years, male 192.1
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 187.1
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 185.7
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 184.2
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 183.3
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 181.4
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 179.9
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 179.5
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 177.2
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 176.7
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 176.1
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 166.3
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 163.0
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 163.0
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 158.5
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 158.4
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 155.4
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 152.9
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 152.2
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 152.0
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 150.3
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 148.6
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 148.2
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 147.6
GTEX-14PN3-2026-SM-68729 60-69 years, female 147.1
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 147.1
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 146.8
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 146.5
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 146.2
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 146.1
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 146.1
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 145.8
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 144.4
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 142.5
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 142.5
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 142.4
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 142.1
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 140.7
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 140.3
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 139.8
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 139.2
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 138.3
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 138.3
GTEX-117YX-0326-SM-5GICL 50-59 years, male 137.2
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 136.9
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 135.3
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 134.1
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 133.7
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 133.4
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 133.3
GTEX-14PKU-1626-SM-6871C 40-49 years, female 132.7
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 130.2
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 129.8
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 128.5
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 128.5
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 128.0
GTEX-144GM-1026-SM-79OKU 20-29 years, male 127.2
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 126.4
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 126.2
GTEX-14PK6-1626-SM-6871I 70-79 years, female 125.5
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 124.8
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 124.2
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 124.1
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 124.0
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 123.6
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 123.4
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 122.6
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 122.0
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 121.7
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 121.6
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 119.4
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 119.1
GTEX-1192X-2526-SM-59868 50-59 years, male 118.9
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 117.9
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 117.8
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 116.5
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 116.2
GTEX-13113-1226-SM-5EGHT 60-69 years, female 114.9
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 113.8
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 113.8
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 113.5
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 112.9
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 112.7
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 112.5
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 112.2
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 111.4
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 111.1
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 110.9
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 110.6
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 110.6
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 110.3
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 109.3
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 108.8
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 108.7
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 108.5
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 108.3
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 108.2
GTEX-1C475-1426-SM-793CH 40-49 years, female 107.3
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 106.8
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 106.0
GTEX-13111-1426-SM-5DUW3 50-59 years, male 105.7
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 104.6
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 104.6
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 102.8
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 102.1
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 102.0
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 101.5
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 101.3
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 100.7
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 99.9
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 99.7
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 99.1
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 98.1
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 97.5
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 97.2
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 96.2
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 95.0
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 94.2
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 94.1
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 93.7
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 93.5
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 93.1
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 92.5
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 92.2
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 91.9
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 91.8
GTEX-13O61-1326-SM-5KM31 60-69 years, male 91.5
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 90.6
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 90.3
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 90.2
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 89.7
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 89.5
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 89.4
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 89.0
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 88.8
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 87.8
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 87.8
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 86.8
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 86.4
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 85.5
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 85.0
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 84.7
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 84.5
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 84.5
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 83.8
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 83.5
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 83.2
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 81.9
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 81.5
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 81.5
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 80.4
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 80.2
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 80.1
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 79.6
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 79.3
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 79.3
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 78.1
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 78.0
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 77.8
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 77.4
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 77.3
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 77.1
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 76.2
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 75.8
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 75.7
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 74.7
GTEX-183FY-1626-SM-793D8 20-29 years, male 74.1
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 73.7
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 72.5
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 72.5
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 72.3
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 72.1
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 70.0
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 69.5
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 68.6
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 67.1
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 66.8
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 66.2
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 64.9
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SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 235.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 235.9
FF:10024-101D6 15,40,85 years, mixed 235.9

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