HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:81.0 nTPM
HPA:81.0 nTPM
GTEx:79.0 nTPM
FANTOM5:115.0 Scaled Tags Per Million
Pig:123.8 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039262Antibody HPA045244Antibody HPA059197Antibody CAB004503
Glial cells Not detectedNot detectedNot detectedNot detected
Neuronal cells Not detectedNot detectedNot detectedNot detected








HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 81.0
Sample id Sample description nTPM
Hippocampus
nTPM: 81.0
1898 Male, age 80, left hemisphere 82.8
1855 Male, age 76, left hemisphere 81.8
2529 Female, age 94, left hemisphere 81.7
2621 Female, age 67, right hemisphere 81.0
1911 Female, age 85, right hemisphere 79.6
2148 Female, age 91, left hemisphere 79.2
Dentate gyrus
nTPM: 79.8
2010 Male, age 76, both hemispheres 83.8
2530 Female, age 94, left hemisphere 82.3
2528 Male, age 74, both hemispheres 79.6
2246 Female, age 85, both hemispheres 78.3
2531 Female, age 67, both hemispheres 78.0
1927 Female, age 91, both hemispheres 76.8
Entorhinal gyrus
nTPM: 76.2
2117 Female, age 91, right hemisphere 81.6
1787 Male, age 76, left hemisphere 77.6
1938 Female, age 85, left hemisphere 77.2
2686 Male, age 75, right hemisphere 75.0
2764 Male, age 80, right hemisphere 73.8
2613 Female, age 94, left hemisphere 71.9
Hippocampus, CA1
nTPM: 78.8
2527 Male, age 74, both hemispheres 81.1
2045 Male, age 76, both hemispheres 79.7
1873 Female, age 85, both hemispheres 79.6
2082 Female, age 91, right hemisphere 77.9
2749 Male, age 80, left hemisphere 75.9
Hippocampus, CA2
nTPM: 80.7
2249 Male, age 74, both hemispheres 85.8
1940 Female, age 85, left hemisphere 80.9
1892 Male, age 76, both hemispheres 79.7
2437 Female, age 94, left hemisphere 79.5
2113 Female, age 91, right hemisphere 79.2
1963 Male, age 80, left hemisphere 78.8
Hippocampus, CA3
nTPM: 80.5
2436 Male, age 74, both hemispheres 87.3
1867 Male, age 76, both hemispheres 82.9
1891 Female, age 85, both hemispheres 80.7
2861 Female, age 67, both hemispheres 79.4
2620 Female, age 94, left hemisphere 76.7
2137 Male, age 80, left hemisphere 75.9
Parahippocampal cortex
nTPM: 77.3
2018 Male, age 76, both hemispheres 87.3
2250 Female, age 67, right hemisphere 78.0
1990 Female, age 91, right hemisphere 77.6
2245 Female, age 91, both hemispheres 77.2
2692 Male, age 74, both hemispheres 76.9
1850 Male, age 80, both hemispheres 76.2
2532 Female, age 72, left hemisphere 75.8
1933 Female, age 85, both hemispheres 75.3
2693 Female, age 94, both hemispheres 75.1
2622 Female, age 67, right hemisphere 73.9
Perirhinal gyrus
nTPM: 76.1
1841 Female, age 85, right hemisphere 77.2
2521 Female, age 94, right hemisphere 77.2
1794 Male, age 80, right hemisphere 76.6
1847 Female, age 91, left hemisphere 75.1
2848 Male, age 76, right hemisphere 74.6
Subiculum
nTPM: 80.5
2042 Male, age 76, both hemispheres 86.3
2438 Female, age 94, left hemisphere 81.3
2729 Female, age 91, right hemisphere 80.3
2619 Male, age 74, both hemispheres 79.4
1901 Male, age 80, both hemispheres 78.3
1977 Female, age 85, both hemispheres 77.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 79.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 79.0
Samples: 197

Max nTPM: 341.4
Min nTPM: 31.6
Std nTPM: 39.5
Median nTPM: 70.0
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 341.4
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 259.3
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 214.6
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 182.4
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 170.5
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 170.2
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 169.2
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 153.0
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 149.6
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 148.8
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 143.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 115.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 115.0
FF:10169-103B7 60 years, female 136.0
FF:10153-102I9 76 years, female 94.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 123.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 121.6
Samples: 4

Max nTPM: 148.1
Min nTPM: 102.6
Sample A Female 148.1
Sample B Female 123.2
Sample C Male 112.5
Sample D Male 102.6
Entorhinal cortex
nTPM: 123.8
Samples: 4

Max nTPM: 136.9
Min nTPM: 103.3
Sample A Female 129.5
Sample B Female 136.9
Sample C Male 125.5
Sample D Male 103.3
Subiculum
nTPM: 117.0
Samples: 4

Max nTPM: 152.2
Min nTPM: 100.8
Sample A Female 152.2
Sample B Female 104.4
Sample C Male 100.8
Sample D Male 110.6
Ventral hippocampus
nTPM: 103.8
Samples: 4

Max nTPM: 117.8
Min nTPM: 89.3
Sample A Female 97.5
Sample B Female 89.3
Sample C Male 110.6
Sample D Male 117.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.