HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:102.3 nTPM
HPA:102.3 nTPM
GTEx:138.8 nTPM
FANTOM5:190.8 Scaled Tags Per Million
Pig:162.6 nTPM
Mouse:367.5 nTPM
Allen mouse:15.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA002877Antibody HPA064724
Glial cells LowMedium
Neuronal cells MediumHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 102.3
Sample id Sample description nTPM
Hippocampus
nTPM: 90.0
1898 Male, age 80, left hemisphere 114.2
1855 Male, age 76, left hemisphere 104.4
2621 Female, age 67, right hemisphere 90.5
1911 Female, age 85, right hemisphere 81.6
2148 Female, age 91, left hemisphere 76.6
2529 Female, age 94, left hemisphere 73.0
Dentate gyrus
nTPM: 93.3
2010 Male, age 76, both hemispheres 116.1
2530 Female, age 94, left hemisphere 99.1
1927 Female, age 91, both hemispheres 97.0
2246 Female, age 85, both hemispheres 89.0
2528 Male, age 74, both hemispheres 82.5
2531 Female, age 67, both hemispheres 75.9
Entorhinal gyrus
nTPM: 86.0
2764 Male, age 80, right hemisphere 95.4
1938 Female, age 85, left hemisphere 92.9
2613 Female, age 94, left hemisphere 92.2
1787 Male, age 76, left hemisphere 88.6
2117 Female, age 91, right hemisphere 76.7
2686 Male, age 75, right hemisphere 70.1
Hippocampus, CA1
nTPM: 102.3
2749 Male, age 80, left hemisphere 131.9
2045 Male, age 76, both hemispheres 111.1
1873 Female, age 85, both hemispheres 102.5
2527 Male, age 74, both hemispheres 84.9
2082 Female, age 91, right hemisphere 80.9
Hippocampus, CA2
nTPM: 96.3
1892 Male, age 76, both hemispheres 118.2
1963 Male, age 80, left hemisphere 117.1
2249 Male, age 74, both hemispheres 94.2
1940 Female, age 85, left hemisphere 85.8
2437 Female, age 94, left hemisphere 83.9
2113 Female, age 91, right hemisphere 78.7
Hippocampus, CA3
nTPM: 91.5
1867 Male, age 76, both hemispheres 107.6
2137 Male, age 80, left hemisphere 107.4
2436 Male, age 74, both hemispheres 90.5
1891 Female, age 85, both hemispheres 85.4
2620 Female, age 94, left hemisphere 80.9
2861 Female, age 67, both hemispheres 77.3
Parahippocampal cortex
nTPM: 87.7
1850 Male, age 80, both hemispheres 101.0
2018 Male, age 76, both hemispheres 100.5
1933 Female, age 85, both hemispheres 97.4
2693 Female, age 94, both hemispheres 90.9
2250 Female, age 67, right hemisphere 89.5
1990 Female, age 91, right hemisphere 87.5
2245 Female, age 91, both hemispheres 87.3
2532 Female, age 72, left hemisphere 84.3
2692 Male, age 74, both hemispheres 70.2
2622 Female, age 67, right hemisphere 68.3
Perirhinal gyrus
nTPM: 102.0
1847 Female, age 91, left hemisphere 109.6
2521 Female, age 94, right hemisphere 106.8
1794 Male, age 80, right hemisphere 101.7
1841 Female, age 85, right hemisphere 96.5
2848 Male, age 76, right hemisphere 95.5
Subiculum
nTPM: 82.6
1977 Female, age 85, both hemispheres 96.7
1901 Male, age 80, both hemispheres 90.6
2042 Male, age 76, both hemispheres 85.3
2438 Female, age 94, left hemisphere 77.5
2619 Male, age 74, both hemispheres 73.7
2729 Female, age 91, right hemisphere 71.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 138.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 138.8
Samples: 197

Max nTPM: 344.9
Min nTPM: 39.5
Std nTPM: 44.0
Median nTPM: 133.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 344.9
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 267.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 266.9
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 242.6
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 238.0
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 235.5
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 234.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 226.1
GTEX-1H3NZ-0011-R1a-SM-CKZP5 60-69 years, male 222.7
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 222.5
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 218.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 190.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 190.8
FF:10169-103B7 60 years, female 268.9
FF:10153-102I9 76 years, female 112.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 162.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 112.8
Samples: 4

Max nTPM: 141.5
Min nTPM: 72.0
Sample A Female 141.5
Sample B Female 116.6
Sample C Male 121.1
Sample D Male 72.0
Entorhinal cortex
nTPM: 122.6
Samples: 4

Max nTPM: 147.2
Min nTPM: 100.4
Sample A Female 129.4
Sample B Female 113.3
Sample C Male 147.2
Sample D Male 100.4
Subiculum
nTPM: 162.6
Samples: 4

Max nTPM: 201.9
Min nTPM: 140.0
Sample A Female 201.9
Sample B Female 150.8
Sample C Male 157.7
Sample D Male 140.0
Ventral hippocampus
nTPM: 124.0
Samples: 4

Max nTPM: 155.5
Min nTPM: 87.2
Sample A Female 127.7
Sample B Female 87.2
Sample C Male 155.5
Sample D Male 125.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 367.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 367.5
Samples: 4

Max nTPM: 421.4
Min nTPM: 303.5
Sample A Male 303.5
Sample B Male 343.0
Sample C Female 401.9
Sample D Female 421.4
Hippocampal formation
nTPM: 324.8
Samples: 4

Max nTPM: 390.5
Min nTPM: 276.3
Sample A Male 390.5
Sample B Male 307.5
Sample C Female 276.3
Sample D Female 325.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 15.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.3
77454574 Antisense, RP_070129_01_A03, Mouse strain C57BL/6J (56 days, male) 25.8
2478 Antisense, RP_Baylor_103188, Mouse strain C57BL/6J (56 days, male) 16.0
2479 Antisense, RP_Baylor_103188, Mouse strain C57BL/6J (56 days, male) 11.1
797 Antisense, RP_040324_01_A05, Mouse strain C57BL/6J (56 days, male) 4.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
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