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TISSUE RETINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN OVARY
PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
Dictionary
Tissue proteome
Eye
Retina
RETINA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:256.7 nTPM
GTEx:256.7 nTPM
FANTOM5:5.5 Scaled Tags Per Million

RETINA - Annotated protein expression
Pending normal tissue analysis

RETINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 256.7
GTEx sample id Sample description nTPM
Retina
Average nTPM: 256.7
Samples: 105

Max nTPM: 631.9
Min nTPM: 12.6
Std nTPM: 121.7
Median nTPM:
319_1 81 years, male 631.9
350_1 84 years, female 587.0
177_1 74 years, male 496.1
318_1 68 years, male 465.5
173_1 67 years, male 464.2
386_1 76 years, male 453.2
349_1 83 years, male 440.1
320_1 89 years, female 431.6
6_1 73 years, female 430.6
99_1 64 years, male 421.1
295_1 61 years, female 420.1
292_1 71 years, male 419.5
4_1 88 years, female 417.7
406_1 79 years, male 414.0
218_1 71 years, female 409.6
352_1 62 years, male 406.6
356_1 87 years, female 399.5
377_1 82 years, female 397.6
163_1 78 years, male 380.4
353_1 82 years, female 372.2
375_1 74 years, female 369.4
404_1 82 years, female 353.5
425_1 59 years, female 341.0
335_1 73 years, female 340.5
321_1 62 years, female 340.4
347_1 72 years, male 338.6
452_1 88 years, female 334.3
376_1 75 years, female 324.9
351_1 91 years, male 308.8
229_1 69 years, female 306.4
354_1 81 years, female 305.3
264_1 73 years, female 301.3
246_1 77 years, male 298.0
251_1 78 years, male 297.8
506_1 65 years, male 296.1
526_1 61 years, male 291.1
286_1 68 years, female 289.2
355_1 70 years, female 285.2
172_1 72 years, female 283.2
109_1 81 years, female 282.9
389_1 86 years, female 281.6
243_1 75 years, male 278.8
447_1 81 years, male 278.8
189_1 76 years, male 276.8
153_1 70 years, female 276.1
237_1 82 years, male 271.1
293_1 68 years, female 271.0
18_1 88 years, male 270.6
517_1 88 years, male 267.1
384_1 83 years, male 264.0
41_1 94 years, female 261.5
145_1 84 years, male 258.3
291_1 76 years, male 254.1
396_1 62 years, male 245.6
254_1 77 years, female 243.7
9_1 66 years, female 240.0
503_1 68 years, male 238.9
468_1 89 years, male 236.4
394_1 75 years, female 236.1
120_1 70 years, female 232.8
405_1 91 years, male 229.8
35_1 74 years, female 228.8
2_1 77 years, female 226.7
17_1 71 years, male 225.4
324_1 76 years, male 224.5
137_1 83 years, male 223.1
139_1 64 years, female 221.3
266_1 85 years, male 214.7
311_1 78 years, male 214.1
265_1 87 years, male 207.4
117_1 61 years, male 207.2
518_1 75 years, female 195.2
317_1 60 years, male 192.8
217_1 76 years, male 183.3
119_1 70 years, female 181.2
313_1 79 years, female 173.5
348_1 84 years, male 172.2
480_1 63 years, male 172.2
315_1 62 years, female 171.4
316_1 62 years, male 171.1
499_1 55 years, female 162.8
314_1 67 years, male 156.7
142_1 61 years, female 151.9
126_1 63 years, male 143.5
81_1 67 years, male 140.0
43_1 64 years, female 139.4
115_1 83 years, male 136.2
288_1 66 years, female 135.5
162_1 79 years, female 134.5
32_1 67 years, male 130.2
42_1 85 years, male 125.3
89_1 63 years, male 116.7
415_1 77 years, female 114.9
307_1 66 years, female 105.8
501_1 88 years, male 101.8
414_1 84 years, female 95.7
149_1 88 years, male 86.5
466_1 57 years, female 85.1
308_1 70 years, female 78.1
495_1 57 years, female 67.6
490_1 67 years, female 65.7
413_1 59 years, female 55.5
491_1 89 years, female 28.4
379_1 60 years, male 21.2
322_1 76 years, male 12.6
Show allShow less

RETINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 5.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Retina
Scaled Tags Per Million: 5.5
FF:10030-101E3 24-65 years, mixed 5.5

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