HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:15.4 nTPM
HPA:15.4 nTPM
GTEx:10.5 nTPM
FANTOM5:21.7 Scaled Tags Per Million
Pig:18.8 nTPM
Mouse:42.4 nTPM
Allen mouse:5.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.4
Sample id Sample description nTPM
Hippocampus
nTPM: 10.6
1898 Male, age 80, left hemisphere 12.8
2621 Female, age 67, right hemisphere 11.4
2148 Female, age 91, left hemisphere 11.3
1855 Male, age 76, left hemisphere 11.0
1911 Female, age 85, right hemisphere 9.6
2529 Female, age 94, left hemisphere 7.4
Dentate gyrus
nTPM: 12.7
1927 Female, age 91, both hemispheres 17.0
2530 Female, age 94, left hemisphere 14.7
2010 Male, age 76, both hemispheres 14.6
2246 Female, age 85, both hemispheres 10.8
2528 Male, age 74, both hemispheres 10.7
2531 Female, age 67, both hemispheres 8.8
Entorhinal gyrus
nTPM: 9.5
2613 Female, age 94, left hemisphere 11.3
1938 Female, age 85, left hemisphere 11.1
1787 Male, age 76, left hemisphere 10.1
2764 Male, age 80, right hemisphere 10.1
2117 Female, age 91, right hemisphere 7.4
2686 Male, age 75, right hemisphere 7.4
Hippocampus, CA1
nTPM: 15.4
2749 Male, age 80, left hemisphere 29.8
1873 Female, age 85, both hemispheres 13.7
2045 Male, age 76, both hemispheres 13.3
2082 Female, age 91, right hemisphere 10.3
2527 Male, age 74, both hemispheres 10.1
Hippocampus, CA2
nTPM: 11.8
1963 Male, age 80, left hemisphere 18.0
1892 Male, age 76, both hemispheres 13.2
2249 Male, age 74, both hemispheres 10.7
2437 Female, age 94, left hemisphere 10.6
1940 Female, age 85, left hemisphere 9.1
2113 Female, age 91, right hemisphere 8.9
Hippocampus, CA3
nTPM: 12.8
2137 Male, age 80, left hemisphere 20.6
2620 Female, age 94, left hemisphere 14.0
1867 Male, age 76, both hemispheres 12.7
2436 Male, age 74, both hemispheres 10.6
2861 Female, age 67, both hemispheres 9.8
1891 Female, age 85, both hemispheres 8.9
Parahippocampal cortex
nTPM: 9.4
2250 Female, age 67, right hemisphere 10.6
1933 Female, age 85, both hemispheres 10.3
1990 Female, age 91, right hemisphere 9.9
2245 Female, age 91, both hemispheres 9.9
2693 Female, age 94, both hemispheres 9.8
2018 Male, age 76, both hemispheres 9.4
1850 Male, age 80, both hemispheres 8.9
2692 Male, age 74, both hemispheres 8.6
2532 Female, age 72, left hemisphere 8.3
2622 Female, age 67, right hemisphere 7.9
Perirhinal gyrus
nTPM: 10.7
1847 Female, age 91, left hemisphere 13.8
2521 Female, age 94, right hemisphere 11.9
1794 Male, age 80, right hemisphere 10.1
1841 Female, age 85, right hemisphere 9.9
2848 Male, age 76, right hemisphere 7.8
Subiculum
nTPM: 9.6
1901 Male, age 80, both hemispheres 12.6
1977 Female, age 85, both hemispheres 10.2
2042 Male, age 76, both hemispheres 9.7
2438 Female, age 94, left hemisphere 9.1
2619 Male, age 74, both hemispheres 8.2
2729 Female, age 91, right hemisphere 7.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.5
Samples: 197

Max nTPM: 32.0
Min nTPM: 2.3
Std nTPM: 6.0
Median nTPM: 9.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 32.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 31.0
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 27.8
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 27.8
GTEX-1IDJH-0011-R1b-SM-ARU6U 70-79 years, male 27.1
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 26.8
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 25.5
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 24.7
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 24.7
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 23.7
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 23.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 21.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 21.7
FF:10169-103B7 60 years, female 29.2
FF:10153-102I9 76 years, female 14.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 17.3
Samples: 4

Max nTPM: 21.6
Min nTPM: 13.2
Sample A Female 21.6
Sample B Female 19.3
Sample C Male 15.2
Sample D Male 13.2
Entorhinal cortex
nTPM: 15.3
Samples: 4

Max nTPM: 18.8
Min nTPM: 13.6
Sample A Female 18.8
Sample B Female 13.6
Sample C Male 14.9
Sample D Male 14.0
Subiculum
nTPM: 16.4
Samples: 4

Max nTPM: 21.4
Min nTPM: 13.8
Sample A Female 21.4
Sample B Female 14.4
Sample C Male 15.8
Sample D Male 13.8
Ventral hippocampus
nTPM: 18.8
Samples: 4

Max nTPM: 24.0
Min nTPM: 11.5
Sample A Female 22.7
Sample B Female 11.5
Sample C Male 24.0
Sample D Male 17.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 42.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 42.4
Samples: 4

Max nTPM: 47.4
Min nTPM: 37.6
Sample A Male 37.6
Sample B Male 39.6
Sample C Female 45.0
Sample D Female 47.4
Hippocampal formation
nTPM: 40.8
Samples: 4

Max nTPM: 43.2
Min nTPM: 37.0
Sample A Male 37.0
Sample B Male 41.5
Sample C Female 43.2
Sample D Female 41.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.4
71608212 Antisense, RP_050927_01_B08, Mouse strain C57BL/6J (56 days, male) 7.5
32583 Antisense, RP_040324_01_F10, Mouse strain C57BL/6J (56 days, male) 3.2

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