HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:36.7 nTPM
HPA:36.7 nTPM
GTEx:40.3 nTPM
FANTOM5:39.2 Scaled Tags Per Million
Pig:22.4 nTPM
Mouse:105.0 nTPM
Allen mouse:1.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001880
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 36.7
Sample id Sample description nTPM
Hippocampus
nTPM: 35.2
1898 Male, age 80, left hemisphere 38.9
2148 Female, age 91, left hemisphere 35.6
2621 Female, age 67, right hemisphere 35.6
2529 Female, age 94, left hemisphere 34.9
1911 Female, age 85, right hemisphere 34.0
1855 Male, age 76, left hemisphere 32.3
Dentate gyrus
nTPM: 34.6
1927 Female, age 91, both hemispheres 36.8
2530 Female, age 94, left hemisphere 36.4
2010 Male, age 76, both hemispheres 34.8
2531 Female, age 67, both hemispheres 34.5
2246 Female, age 85, both hemispheres 33.7
2528 Male, age 74, both hemispheres 31.6
Entorhinal gyrus
nTPM: 34.6
2117 Female, age 91, right hemisphere 36.9
2764 Male, age 80, right hemisphere 36.2
1787 Male, age 76, left hemisphere 34.8
1938 Female, age 85, left hemisphere 34.3
2686 Male, age 75, right hemisphere 34.0
2613 Female, age 94, left hemisphere 31.5
Hippocampus, CA1
nTPM: 36.7
2749 Male, age 80, left hemisphere 39.9
2045 Male, age 76, both hemispheres 37.0
2527 Male, age 74, both hemispheres 36.5
1873 Female, age 85, both hemispheres 35.7
2082 Female, age 91, right hemisphere 34.6
Hippocampus, CA2
nTPM: 35.0
1963 Male, age 80, left hemisphere 38.4
1892 Male, age 76, both hemispheres 37.0
2249 Male, age 74, both hemispheres 34.1
2437 Female, age 94, left hemisphere 33.8
1940 Female, age 85, left hemisphere 33.6
2113 Female, age 91, right hemisphere 33.2
Hippocampus, CA3
nTPM: 34.6
1867 Male, age 76, both hemispheres 37.3
2620 Female, age 94, left hemisphere 36.1
2137 Male, age 80, left hemisphere 35.0
2861 Female, age 67, both hemispheres 34.1
1891 Female, age 85, both hemispheres 33.0
2436 Male, age 74, both hemispheres 31.8
Parahippocampal cortex
nTPM: 34.8
1933 Female, age 85, both hemispheres 37.9
2250 Female, age 67, right hemisphere 37.5
1850 Male, age 80, both hemispheres 36.4
1990 Female, age 91, right hemisphere 34.7
2532 Female, age 72, left hemisphere 34.5
2018 Male, age 76, both hemispheres 34.3
2245 Female, age 91, both hemispheres 33.8
2692 Male, age 74, both hemispheres 33.4
2622 Female, age 67, right hemisphere 32.6
2693 Female, age 94, both hemispheres 32.6
Perirhinal gyrus
nTPM: 35.7
1847 Female, age 91, left hemisphere 37.4
2521 Female, age 94, right hemisphere 36.2
1841 Female, age 85, right hemisphere 35.8
1794 Male, age 80, right hemisphere 35.2
2848 Male, age 76, right hemisphere 34.0
Subiculum
nTPM: 34.1
1977 Female, age 85, both hemispheres 36.6
2042 Male, age 76, both hemispheres 35.4
2729 Female, age 91, right hemisphere 34.1
2619 Male, age 74, both hemispheres 33.9
1901 Male, age 80, both hemispheres 33.0
2438 Female, age 94, left hemisphere 31.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 40.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 40.3
Samples: 197

Max nTPM: 67.5
Min nTPM: 20.0
Std nTPM: 9.7
Median nTPM: 39.3
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 67.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 66.7
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 66.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 66.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 65.7
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 65.3
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 63.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 60.8
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 60.3
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 59.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 56.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 39.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 39.3
FF:10169-103B7 60 years, female 40.8
FF:10153-102I9 76 years, female 37.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 22.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 22.4
Samples: 4

Max nTPM: 30.1
Min nTPM: 17.2
Sample A Female 30.1
Sample B Female 20.0
Sample C Male 22.4
Sample D Male 17.2
Entorhinal cortex
nTPM: 17.7
Samples: 4

Max nTPM: 20.0
Min nTPM: 16.0
Sample A Female 20.0
Sample B Female 17.7
Sample C Male 16.9
Sample D Male 16.0
Subiculum
nTPM: 18.9
Samples: 4

Max nTPM: 24.2
Min nTPM: 16.1
Sample A Female 24.2
Sample B Female 17.3
Sample C Male 18.0
Sample D Male 16.1
Ventral hippocampus
nTPM: 20.8
Samples: 4

Max nTPM: 24.3
Min nTPM: 14.4
Sample A Female 21.7
Sample B Female 14.4
Sample C Male 24.3
Sample D Male 22.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 105.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 105.0
Samples: 4

Max nTPM: 111.3
Min nTPM: 96.0
Sample A Male 96.0
Sample B Male 103.5
Sample C Female 109.3
Sample D Female 111.3
Hippocampal formation
nTPM: 102.6
Samples: 4

Max nTPM: 103.6
Min nTPM: 99.8
Sample A Male 103.6
Sample B Male 103.4
Sample C Female 103.6
Sample D Female 99.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.7
68269676 Antisense, RP_041129_02_A07, Mouse strain C57BL/6J (56 days, male) 4.8
70919758 Antisense, RP_050713_02_A05, Mouse strain C57BL/6J (56 days, male) 0.2
1520 Antisense, RP_Baylor_103203, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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