HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:92.7 nTPM
HPA:92.7 nTPM
GTEx:34.4 nTPM
FANTOM5:262.9 Scaled Tags Per Million
Pig:58.5 nTPM
Mouse:682.1 nTPM
Allen mouse:20.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA045385Antibody HPA073644Antibody HPA073656Antibody CAB010065
Glial cells Not detectedNot detectedNot detectedNot detected
Neuronal cells Not detectedNot detectedNot detectedNot detected







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 92.7
Sample id Sample description nTPM
Hippocampus
nTPM: 81.1
1898 Male, age 80, left hemisphere 100.1
2529 Female, age 94, left hemisphere 83.9
2621 Female, age 67, right hemisphere 76.9
1855 Male, age 76, left hemisphere 75.8
2148 Female, age 91, left hemisphere 75.7
1911 Female, age 85, right hemisphere 74.1
Dentate gyrus
nTPM: 83.4
2010 Male, age 76, both hemispheres 94.3
1927 Female, age 91, both hemispheres 90.1
2528 Male, age 74, both hemispheres 83.3
2530 Female, age 94, left hemisphere 81.4
2246 Female, age 85, both hemispheres 78.6
2531 Female, age 67, both hemispheres 73.0
Entorhinal gyrus
nTPM: 79.4
2764 Male, age 80, right hemisphere 89.3
1938 Female, age 85, left hemisphere 86.8
1787 Male, age 76, left hemisphere 80.6
2117 Female, age 91, right hemisphere 75.7
2686 Male, age 75, right hemisphere 72.4
2613 Female, age 94, left hemisphere 71.6
Hippocampus, CA1
nTPM: 88.4
2749 Male, age 80, left hemisphere 109.2
2527 Male, age 74, both hemispheres 90.4
1873 Female, age 85, both hemispheres 83.1
2045 Male, age 76, both hemispheres 82.3
2082 Female, age 91, right hemisphere 77.0
Hippocampus, CA2
nTPM: 88.0
2249 Male, age 74, both hemispheres 99.8
1892 Male, age 76, both hemispheres 99.2
1963 Male, age 80, left hemisphere 92.0
2437 Female, age 94, left hemisphere 80.2
1940 Female, age 85, left hemisphere 79.4
2113 Female, age 91, right hemisphere 77.5
Hippocampus, CA3
nTPM: 85.0
2436 Male, age 74, both hemispheres 99.4
1867 Male, age 76, both hemispheres 93.2
2137 Male, age 80, left hemisphere 93.2
1891 Female, age 85, both hemispheres 78.9
2620 Female, age 94, left hemisphere 73.7
2861 Female, age 67, both hemispheres 71.3
Parahippocampal cortex
nTPM: 83.0
1850 Male, age 80, both hemispheres 98.0
2250 Female, age 67, right hemisphere 90.1
1990 Female, age 91, right hemisphere 89.4
2018 Male, age 76, both hemispheres 87.4
1933 Female, age 85, both hemispheres 83.7
2245 Female, age 91, both hemispheres 79.8
2532 Female, age 72, left hemisphere 79.1
2693 Female, age 94, both hemispheres 77.5
2692 Male, age 74, both hemispheres 75.0
2622 Female, age 67, right hemisphere 69.8
Perirhinal gyrus
nTPM: 92.7
1794 Male, age 80, right hemisphere 100.9
1841 Female, age 85, right hemisphere 99.2
1847 Female, age 91, left hemisphere 96.3
2521 Female, age 94, right hemisphere 86.0
2848 Male, age 76, right hemisphere 81.0
Subiculum
nTPM: 79.0
1977 Female, age 85, both hemispheres 88.8
1901 Male, age 80, both hemispheres 84.1
2619 Male, age 74, both hemispheres 77.5
2042 Male, age 76, both hemispheres 75.0
2438 Female, age 94, left hemisphere 75.0
2729 Female, age 91, right hemisphere 73.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 34.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 34.4
Samples: 197

Max nTPM: 80.1
Min nTPM: 14.9
Std nTPM: 12.3
Median nTPM: 31.4
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 80.1
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 72.4
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 72.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 71.1
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 65.0
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 62.3
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 61.4
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 61.4
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 61.0
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 59.3
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 58.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 262.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 262.9
FF:10169-103B7 60 years, female 319.1
FF:10153-102I9 76 years, female 206.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 58.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 58.5
Samples: 4

Max nTPM: 75.6
Min nTPM: 45.6
Sample A Female 75.6
Sample B Female 57.3
Sample C Male 55.4
Sample D Male 45.6
Entorhinal cortex
nTPM: 51.5
Samples: 4

Max nTPM: 64.5
Min nTPM: 42.9
Sample A Female 52.8
Sample B Female 64.5
Sample C Male 45.9
Sample D Male 42.9
Subiculum
nTPM: 46.3
Samples: 4

Max nTPM: 59.6
Min nTPM: 39.0
Sample A Female 59.6
Sample B Female 44.7
Sample C Male 39.0
Sample D Male 42.0
Ventral hippocampus
nTPM: 50.4
Samples: 4

Max nTPM: 57.6
Min nTPM: 37.0
Sample A Female 57.6
Sample B Female 37.0
Sample C Male 53.1
Sample D Male 54.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 682.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 635.1
Samples: 4

Max nTPM: 667.3
Min nTPM: 594.5
Sample A Male 594.5
Sample B Male 638.7
Sample C Female 667.3
Sample D Female 639.9
Hippocampal formation
nTPM: 682.1
Samples: 4

Max nTPM: 758.1
Min nTPM: 609.5
Sample A Male 758.1
Sample B Male 609.5
Sample C Female 682.8
Sample D Female 678.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 20.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 20.8
69783047 Antisense, RP_050505_04_C05, Mouse strain C57BL/6J (56 days, male) 20.8

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The Human Protein Atlas

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