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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:101.1 nTPM
FANTOM5:303.2 Scaled Tags Per Million
Pig:54.0 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA003103Antibody HPA037536
Glial cells Not detectedNot detected
Neuronal cells MediumMedium





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 101.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 101.1
Samples: 246

Max nTPM: 204.7
Min nTPM: 50.8
Std nTPM: 31.7
Median nTPM: 98.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 204.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 187.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 179.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 171.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 169.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 167.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 167.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 165.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 164.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 164.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 161.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 158.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 157.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 156.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 154.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 154.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 153.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 151.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 150.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 150.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 149.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 148.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 148.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 147.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 146.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 146.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 145.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 144.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 143.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 143.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 142.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 137.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 136.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 135.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 135.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 135.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 135.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 134.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 134.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 134.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 134.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 134.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 133.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 132.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 132.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 132.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 132.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 132.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 132.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 130.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 130.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 129.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 129.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 128.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 128.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 127.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 126.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 126.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 125.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 122.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 122.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 121.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 121.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 121.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 121.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 120.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 120.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 120.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 119.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 118.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 117.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 117.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 117.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 117.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 116.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 115.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 115.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 114.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 114.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 114.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 113.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 113.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 113.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 113.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 113.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 112.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 111.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 111.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 110.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 110.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 109.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 109.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 109.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 108.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 108.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 108.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 107.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 107.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 106.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 106.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 105.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 105.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 104.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 104.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 104.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 104.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 104.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 104.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 103.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 103.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 103.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 102.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 102.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 102.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 101.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 100.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 100.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 100.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 99.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 99.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 99.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 98.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 98.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 97.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 97.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 96.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 96.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 96.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 96.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 95.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 95.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 95.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 94.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 94.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 93.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 93.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 93.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 92.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 91.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 91.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 91.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 91.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 91.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 91.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 90.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 90.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 90.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 89.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 89.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 88.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 87.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 87.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 87.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 86.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 86.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 85.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 85.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 85.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 85.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 85.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 84.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 84.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 84.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 83.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 83.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 82.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 82.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 82.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 81.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 81.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 81.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 81.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 80.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 80.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 80.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 80.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 77.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 76.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 76.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 76.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 74.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 73.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 73.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 73.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 73.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 73.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 73.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 72.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 72.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 72.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 72.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 71.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 71.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 71.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 71.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 71.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 70.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 70.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 70.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 70.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 69.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 69.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 69.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 69.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 68.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 68.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 67.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 67.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 67.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 65.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 65.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 65.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 64.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 63.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 63.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 63.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 62.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 61.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 61.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 60.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 60.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 60.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 60.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 60.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 60.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 59.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 59.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 59.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 59.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 58.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 58.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 57.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 57.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 57.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 57.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 56.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 56.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 55.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 54.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 54.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 53.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 52.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 52.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 52.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 51.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 50.8
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 303.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 303.2
FF:10164-103B2 76 years, female 303.2

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 54.0
Pig sample Sample description nTPM
Caudate
nTPM: 54.0
Samples: 4

Max nTPM: 61.4
Min nTPM: 45.8
Sample A Female 45.8
Sample B Female 58.5
Sample C Male 61.4
Sample D Male 50.2

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