HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:113.5 nTPM
HPA:113.5 nTPM
GTEx:64.2 nTPM
FANTOM5:56.1 Scaled Tags Per Million
Pig:20.3 nTPM
Mouse:1.5 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA053417Antibody CAB022360
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 113.5
Sample id Sample description nTPM
Hippocampus
nTPM: 109.7
2621 Female, age 67, right hemisphere 111.4
1855 Male, age 76, left hemisphere 111.1
2148 Female, age 91, left hemisphere 110.3
2529 Female, age 94, left hemisphere 109.3
1898 Male, age 80, left hemisphere 109.0
1911 Female, age 85, right hemisphere 107.2
Dentate gyrus
nTPM: 110.0
2528 Male, age 74, both hemispheres 114.0
2531 Female, age 67, both hemispheres 112.5
2246 Female, age 85, both hemispheres 110.5
2530 Female, age 94, left hemisphere 108.4
2010 Male, age 76, both hemispheres 108.3
1927 Female, age 91, both hemispheres 106.5
Entorhinal gyrus
nTPM: 106.6
2117 Female, age 91, right hemisphere 110.6
2686 Male, age 75, right hemisphere 109.0
1938 Female, age 85, left hemisphere 107.4
1787 Male, age 76, left hemisphere 106.0
2613 Female, age 94, left hemisphere 104.2
2764 Male, age 80, right hemisphere 102.4
Hippocampus, CA1
nTPM: 108.2
2527 Male, age 74, both hemispheres 112.2
2045 Male, age 76, both hemispheres 109.7
1873 Female, age 85, both hemispheres 108.4
2082 Female, age 91, right hemisphere 107.9
2749 Male, age 80, left hemisphere 102.6
Hippocampus, CA2
nTPM: 108.8
2249 Male, age 74, both hemispheres 112.8
2437 Female, age 94, left hemisphere 111.4
2113 Female, age 91, right hemisphere 108.8
1892 Male, age 76, both hemispheres 107.3
1940 Female, age 85, left hemisphere 107.3
1963 Male, age 80, left hemisphere 105.4
Hippocampus, CA3
nTPM: 113.5
1867 Male, age 76, both hemispheres 120.1
2436 Male, age 74, both hemispheres 120.1
2861 Female, age 67, both hemispheres 114.5
2620 Female, age 94, left hemisphere 111.4
1891 Female, age 85, both hemispheres 107.9
2137 Male, age 80, left hemisphere 106.8
Parahippocampal cortex
nTPM: 108.4
2018 Male, age 76, both hemispheres 111.2
2692 Male, age 74, both hemispheres 111.2
2250 Female, age 67, right hemisphere 110.3
1933 Female, age 85, both hemispheres 109.4
2245 Female, age 91, both hemispheres 108.4
2532 Female, age 72, left hemisphere 108.1
2622 Female, age 67, right hemisphere 107.8
1990 Female, age 91, right hemisphere 107.4
2693 Female, age 94, both hemispheres 106.4
1850 Male, age 80, both hemispheres 103.6
Perirhinal gyrus
nTPM: 107.0
2521 Female, age 94, right hemisphere 114.8
1841 Female, age 85, right hemisphere 106.4
1847 Female, age 91, left hemisphere 105.6
1794 Male, age 80, right hemisphere 104.1
2848 Male, age 76, right hemisphere 103.9
Subiculum
nTPM: 108.5
2619 Male, age 74, both hemispheres 111.4
2042 Male, age 76, both hemispheres 111.0
2729 Female, age 91, right hemisphere 110.9
1977 Female, age 85, both hemispheres 107.9
2438 Female, age 94, left hemisphere 105.2
1901 Male, age 80, both hemispheres 104.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 64.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 64.2
Samples: 197

Max nTPM: 916.5
Min nTPM: 12.2
Std nTPM: 79.8
Median nTPM: 43.3
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 916.5
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 384.7
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 323.3
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 257.3
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 231.9
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 226.3
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 214.4
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 200.5
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 196.3
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 187.1
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 182.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 56.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 56.1
FF:10169-103B7 60 years, female 89.9
FF:10153-102I9 76 years, female 22.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 20.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 13.0
Samples: 4

Max nTPM: 16.8
Min nTPM: 9.7
Sample A Female 16.8
Sample B Female 11.1
Sample C Male 14.4
Sample D Male 9.7
Entorhinal cortex
nTPM: 16.0
Samples: 4

Max nTPM: 26.4
Min nTPM: 7.8
Sample A Female 26.4
Sample B Female 15.0
Sample C Male 14.6
Sample D Male 7.8
Subiculum
nTPM: 20.3
Samples: 4

Max nTPM: 28.9
Min nTPM: 12.3
Sample A Female 20.2
Sample B Female 12.3
Sample C Male 19.8
Sample D Male 28.9
Ventral hippocampus
nTPM: 16.3
Samples: 4

Max nTPM: 24.2
Min nTPM: 12.6
Sample A Female 15.2
Sample B Female 12.6
Sample C Male 24.2
Sample D Male 13.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1.6
Samples: 4

Max nTPM: 1.8
Min nTPM: 1.1
Sample A Male 1.1
Sample B Male 1.7
Sample C Female 1.6
Sample D Female 1.8
Hippocampal formation
nTPM: 0.6
Samples: 4

Max nTPM: 0.9
Min nTPM: 0.4
Sample A Male 0.5
Sample B Male 0.9
Sample C Female 0.4
Sample D Female 0.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
68668108 Antisense, RP_050203_01_D10, Mouse strain C57BL/6J (56 days, male) 0.3
77790730 Antisense, RP_070208_04_B03, Mouse strain C57BL/6J (56 days, male) 0.1

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