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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:210.6 nTPM
FANTOM5:571.2 Scaled Tags Per Million
Pig:88.2 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA045105
Glial cells Not detected
Neuronal cells Not detected



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 210.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 210.6
Samples: 246

Max nTPM: 470.4
Min nTPM: 99.4
Std nTPM: 65.7
Median nTPM: 207.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 470.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 428.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 407.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 381.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 379.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 360.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 358.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 321.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 321.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 320.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 319.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 317.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 315.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 314.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 313.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 311.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 308.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 306.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 305.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 301.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 299.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 294.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 292.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 291.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 289.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 289.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 288.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 288.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 287.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 284.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 284.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 282.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 281.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 281.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 277.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 277.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 274.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 270.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 270.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 270.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 270.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 268.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 268.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 267.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 267.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 265.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 264.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 262.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 262.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 261.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 261.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 261.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 259.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 259.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 258.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 258.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 257.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 257.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 256.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 255.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 254.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 253.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 252.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 250.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 250.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 249.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 249.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 246.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 246.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 245.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 245.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 245.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 245.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 244.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 244.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 244.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 244.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 243.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 243.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 243.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 242.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 242.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 242.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 241.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 241.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 241.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 239.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 237.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 237.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 237.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 236.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 235.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 235.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 235.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 233.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 233.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 232.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 232.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 230.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 230.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 229.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 228.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 227.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 225.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 224.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 223.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 221.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 221.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 220.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 220.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 219.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 217.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 216.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 214.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 213.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 213.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 213.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 212.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 211.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 211.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 211.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 208.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 207.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 207.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 205.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 204.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 204.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 203.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 203.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 202.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 200.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 200.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 197.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 197.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 197.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 196.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 195.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 194.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 194.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 193.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 193.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 193.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 191.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 191.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 189.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 189.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 189.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 188.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 187.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 187.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 185.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 185.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 184.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 184.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 183.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 183.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 182.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 181.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 181.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 181.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 180.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 179.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 179.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 178.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 177.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 176.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 176.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 176.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 175.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 174.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 173.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 173.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 170.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 170.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 169.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 167.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 167.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 167.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 165.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 165.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 165.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 164.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 163.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 162.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 160.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 160.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 160.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 159.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 158.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 156.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 153.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 152.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 149.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 149.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 149.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 149.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 148.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 148.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 145.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 145.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 144.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 142.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 140.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 139.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 139.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 138.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 136.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 136.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 135.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 134.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 132.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 131.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 130.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 129.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 129.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 127.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 127.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 123.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 122.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 122.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 122.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 121.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 121.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 121.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 120.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 119.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 118.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 117.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 116.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 116.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 116.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 116.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 116.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 115.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 115.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 115.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 114.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 113.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 113.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 110.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 109.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 107.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 106.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 105.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 105.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 99.4
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 571.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 571.2
FF:10164-103B2 76 years, female 571.2

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 88.2
Pig sample Sample description nTPM
Caudate
nTPM: 88.2
Samples: 4

Max nTPM: 108.8
Min nTPM: 73.9
Sample A Female 79.8
Sample B Female 90.4
Sample C Male 108.8
Sample D Male 73.9

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