HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:33.3 nTPM
HPA:33.3 nTPM
GTEx:24.8 nTPM
FANTOM5:71.4 Scaled Tags Per Million
Pig:15.5 nTPM
Mouse:18.3 nTPM
Allen mouse:1.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA011740Antibody HPA014290Antibody CAB068189Antibody CAB068190
Glial cells Not detectedLowNot detectedNot detected
Neuronal cells Not detectedHighNot detectedNot detected






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 33.3
Sample id Sample description nTPM
Hippocampus
nTPM: 30.3
1911 Female, age 85, right hemisphere 36.4
2529 Female, age 94, left hemisphere 33.7
2621 Female, age 67, right hemisphere 30.2
1855 Male, age 76, left hemisphere 30.0
2148 Female, age 91, left hemisphere 27.2
1898 Male, age 80, left hemisphere 24.2
Dentate gyrus
nTPM: 32.1
2530 Female, age 94, left hemisphere 45.2
2010 Male, age 76, both hemispheres 34.7
2531 Female, age 67, both hemispheres 32.2
2528 Male, age 74, both hemispheres 27.4
2246 Female, age 85, both hemispheres 26.5
1927 Female, age 91, both hemispheres 26.3
Entorhinal gyrus
nTPM: 24.1
2686 Male, age 75, right hemisphere 31.1
1787 Male, age 76, left hemisphere 26.9
2117 Female, age 91, right hemisphere 22.9
2613 Female, age 94, left hemisphere 22.0
2764 Male, age 80, right hemisphere 21.3
1938 Female, age 85, left hemisphere 20.5
Hippocampus, CA1
nTPM: 28.2
2527 Male, age 74, both hemispheres 34.0
2045 Male, age 76, both hemispheres 31.1
1873 Female, age 85, both hemispheres 26.8
2082 Female, age 91, right hemisphere 25.2
2749 Male, age 80, left hemisphere 23.9
Hippocampus, CA2
nTPM: 31.2
1963 Male, age 80, left hemisphere 38.7
2437 Female, age 94, left hemisphere 38.4
2249 Male, age 74, both hemispheres 30.7
2113 Female, age 91, right hemisphere 29.1
1892 Male, age 76, both hemispheres 27.4
1940 Female, age 85, left hemisphere 23.2
Hippocampus, CA3
nTPM: 33.3
2861 Female, age 67, both hemispheres 46.3
1867 Male, age 76, both hemispheres 37.9
2137 Male, age 80, left hemisphere 32.9
1891 Female, age 85, both hemispheres 30.5
2436 Male, age 74, both hemispheres 26.2
2620 Female, age 94, left hemisphere 25.7
Parahippocampal cortex
nTPM: 27.2
2018 Male, age 76, both hemispheres 46.5
2622 Female, age 67, right hemisphere 31.2
2245 Female, age 91, both hemispheres 27.0
2532 Female, age 72, left hemisphere 26.5
2693 Female, age 94, both hemispheres 25.2
1850 Male, age 80, both hemispheres 25.0
2692 Male, age 74, both hemispheres 23.9
1990 Female, age 91, right hemisphere 22.7
2250 Female, age 67, right hemisphere 22.1
1933 Female, age 85, both hemispheres 21.7
Perirhinal gyrus
nTPM: 23.6
1841 Female, age 85, right hemisphere 28.8
2848 Male, age 76, right hemisphere 23.5
1794 Male, age 80, right hemisphere 22.9
1847 Female, age 91, left hemisphere 21.5
2521 Female, age 94, right hemisphere 21.1
Subiculum
nTPM: 29.1
2438 Female, age 94, left hemisphere 35.6
2042 Male, age 76, both hemispheres 34.9
2619 Male, age 74, both hemispheres 29.1
2729 Female, age 91, right hemisphere 25.5
1901 Male, age 80, both hemispheres 25.4
1977 Female, age 85, both hemispheres 24.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 24.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.8
Samples: 197

Max nTPM: 136.2
Min nTPM: 1.5
Std nTPM: 18.6
Median nTPM: 19.3
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 136.2
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 120.3
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 105.3
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 83.4
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 65.4
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 64.9
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 61.7
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 61.7
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 57.8
GTEX-145LS-0011-R1b-SM-5PNUP 60-69 years, female 57.6
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 56.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 71.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 71.4
FF:10153-102I9 76 years, female 106.1
FF:10169-103B7 60 years, female 36.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 10.5
Samples: 4

Max nTPM: 14.3
Min nTPM: 8.8
Sample A Female 9.8
Sample B Female 8.8
Sample C Male 14.3
Sample D Male 9.0
Entorhinal cortex
nTPM: 15.5
Samples: 4

Max nTPM: 18.2
Min nTPM: 12.6
Sample A Female 14.5
Sample B Female 16.7
Sample C Male 18.2
Sample D Male 12.6
Subiculum
nTPM: 11.2
Samples: 4

Max nTPM: 12.8
Min nTPM: 8.4
Sample A Female 12.8
Sample B Female 8.4
Sample C Male 11.4
Sample D Male 12.2
Ventral hippocampus
nTPM: 11.5
Samples: 4

Max nTPM: 16.9
Min nTPM: 8.4
Sample A Female 8.4
Sample B Female 9.6
Sample C Male 16.9
Sample D Male 10.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 18.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 18.3
Samples: 4

Max nTPM: 19.4
Min nTPM: 17.1
Sample A Male 19.0
Sample B Male 17.7
Sample C Female 17.1
Sample D Female 19.4
Hippocampal formation
nTPM: 14.0
Samples: 4

Max nTPM: 16.8
Min nTPM: 11.8
Sample A Male 11.8
Sample B Male 16.8
Sample C Female 15.0
Sample D Female 12.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.1
2225 Antisense, RP_040526_02_D10, Mouse strain C57BL/6J (56 days, male) 1.1
2224 Antisense, RP_040526_02_D10, Mouse strain C57BL/6J (56 days, male) 1.0

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The Human Protein Atlas

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