HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:36.9 nTPM
HPA:36.9 nTPM
GTEx:35.0 nTPM
FANTOM5:57.4 Scaled Tags Per Million
Pig:15.7 nTPM
Mouse:111.9 nTPM
Allen mouse:1.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA051132Antibody CAB046473
Glial cells MediumLow
Neuronal cells Not detectedMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 36.9
Sample id Sample description nTPM
Hippocampus
nTPM: 30.8
1855 Male, age 76, left hemisphere 34.5
1898 Male, age 80, left hemisphere 33.9
2621 Female, age 67, right hemisphere 33.6
1911 Female, age 85, right hemisphere 28.8
2148 Female, age 91, left hemisphere 28.6
2529 Female, age 94, left hemisphere 25.5
Dentate gyrus
nTPM: 31.1
2531 Female, age 67, both hemispheres 34.2
2246 Female, age 85, both hemispheres 32.4
2010 Male, age 76, both hemispheres 32.1
1927 Female, age 91, both hemispheres 31.0
2530 Female, age 94, left hemisphere 30.7
2528 Male, age 74, both hemispheres 26.4
Entorhinal gyrus
nTPM: 30.7
2613 Female, age 94, left hemisphere 34.7
1787 Male, age 76, left hemisphere 33.3
2764 Male, age 80, right hemisphere 31.5
2117 Female, age 91, right hemisphere 30.7
1938 Female, age 85, left hemisphere 28.7
2686 Male, age 75, right hemisphere 25.5
Hippocampus, CA1
nTPM: 31.0
2045 Male, age 76, both hemispheres 33.7
2749 Male, age 80, left hemisphere 32.6
2082 Female, age 91, right hemisphere 32.3
1873 Female, age 85, both hemispheres 29.7
2527 Male, age 74, both hemispheres 26.6
Hippocampus, CA2
nTPM: 31.8
1940 Female, age 85, left hemisphere 42.7
1892 Male, age 76, both hemispheres 33.9
2113 Female, age 91, right hemisphere 31.0
2437 Female, age 94, left hemisphere 30.5
1963 Male, age 80, left hemisphere 28.4
2249 Male, age 74, both hemispheres 24.4
Hippocampus, CA3
nTPM: 30.2
1867 Male, age 76, both hemispheres 34.4
2861 Female, age 67, both hemispheres 33.4
2620 Female, age 94, left hemisphere 32.8
2137 Male, age 80, left hemisphere 31.0
1891 Female, age 85, both hemispheres 26.5
2436 Male, age 74, both hemispheres 23.1
Parahippocampal cortex
nTPM: 33.1
2250 Female, age 67, right hemisphere 45.5
2532 Female, age 72, left hemisphere 36.8
1933 Female, age 85, both hemispheres 36.2
2693 Female, age 94, both hemispheres 36.1
2018 Male, age 76, both hemispheres 36.0
2245 Female, age 91, both hemispheres 34.8
1990 Female, age 91, right hemisphere 28.6
2622 Female, age 67, right hemisphere 28.3
1850 Male, age 80, both hemispheres 27.9
2692 Male, age 74, both hemispheres 21.0
Perirhinal gyrus
nTPM: 36.9
2521 Female, age 94, right hemisphere 47.2
1847 Female, age 91, left hemisphere 36.8
1841 Female, age 85, right hemisphere 35.0
1794 Male, age 80, right hemisphere 32.9
2848 Male, age 76, right hemisphere 32.6
Subiculum
nTPM: 28.4
1977 Female, age 85, both hemispheres 32.7
2729 Female, age 91, right hemisphere 31.7
2042 Male, age 76, both hemispheres 29.3
1901 Male, age 80, both hemispheres 27.9
2619 Male, age 74, both hemispheres 25.4
2438 Female, age 94, left hemisphere 23.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 35.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 35.0
Samples: 197

Max nTPM: 77.8
Min nTPM: 7.7
Std nTPM: 15.0
Median nTPM: 34.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 77.8
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 75.6
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 74.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 73.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 73.0
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 63.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 63.4
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 61.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 61.3
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 61.1
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 60.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 57.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 57.4
FF:10169-103B7 60 years, female 58.5
FF:10153-102I9 76 years, female 56.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 12.6
Samples: 4

Max nTPM: 16.3
Min nTPM: 8.8
Sample A Female 16.3
Sample B Female 13.5
Sample C Male 11.7
Sample D Male 8.8
Entorhinal cortex
nTPM: 14.8
Samples: 4

Max nTPM: 15.7
Min nTPM: 13.3
Sample A Female 15.7
Sample B Female 14.8
Sample C Male 15.5
Sample D Male 13.3
Subiculum
nTPM: 15.7
Samples: 4

Max nTPM: 21.3
Min nTPM: 13.0
Sample A Female 21.3
Sample B Female 15.3
Sample C Male 13.3
Sample D Male 13.0
Ventral hippocampus
nTPM: 13.8
Samples: 4

Max nTPM: 16.5
Min nTPM: 10.9
Sample A Female 16.0
Sample B Female 10.9
Sample C Male 16.5
Sample D Male 11.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 111.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 111.9
Samples: 4

Max nTPM: 133.1
Min nTPM: 95.3
Sample A Male 104.1
Sample B Male 133.1
Sample C Female 95.3
Sample D Female 115.0
Hippocampal formation
nTPM: 97.0
Samples: 4

Max nTPM: 109.4
Min nTPM: 86.2
Sample A Male 109.4
Sample B Male 93.2
Sample C Female 86.2
Sample D Female 99.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.5
67978734 Antisense, RP_040923_01_G03, Mouse strain C57BL/6J (56 days, male) 1.5

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