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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:140.5 nTPM
FANTOM5:74.0 Scaled Tags Per Million
Pig:84.1 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA003995Antibody HPA005700Antibody HPA030069Antibody CAB002683
Glial cells Not detectedHighLowLow
Neuronal cells Medium-MediumHigh








CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 140.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 140.5
Samples: 246

Max nTPM: 252.5
Min nTPM: 73.2
Std nTPM: 32.7
Median nTPM: 137.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 252.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 242.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 239.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 224.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 222.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 218.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 208.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 205.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 205.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 200.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 200.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 197.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 197.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 196.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 194.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 194.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 192.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 192.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 189.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 189.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 188.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 187.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 187.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 187.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 186.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 186.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 183.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 181.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 180.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 179.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 179.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 178.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 177.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 177.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 177.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 177.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 176.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 176.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 176.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 175.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 175.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 174.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 172.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 171.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 171.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 170.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 170.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 169.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 169.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 168.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 167.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 167.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 166.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 165.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 163.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 162.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 162.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 161.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 161.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 161.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 160.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 160.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 159.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 159.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 158.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 158.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 157.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 157.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 157.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 156.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 156.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 156.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 156.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 154.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 152.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 152.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 152.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 152.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 152.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 152.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 151.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 151.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 151.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 150.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 150.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 150.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 149.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 149.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 148.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 148.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 147.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 147.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 147.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 147.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 147.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 147.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 147.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 146.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 145.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 145.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 144.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 144.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 144.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 143.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 143.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 143.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 143.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 142.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 142.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 141.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 141.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 141.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 140.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 140.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 139.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 139.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 139.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 139.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 139.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 139.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 138.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 138.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 137.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 137.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 137.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 136.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 136.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 135.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 135.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 135.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 135.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 135.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 135.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 134.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 134.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 133.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 132.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 131.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 131.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 131.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 130.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 130.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 130.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 130.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 129.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 128.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 128.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 128.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 127.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 127.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 127.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 127.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 127.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 126.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 125.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 125.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 125.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 125.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 124.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 124.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 124.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 123.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 123.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 123.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 123.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 122.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 122.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 121.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 121.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 120.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 120.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 120.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 119.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 119.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 119.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 118.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 118.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 118.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 118.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 118.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 117.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 117.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 116.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 116.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 115.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 114.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 114.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 114.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 114.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 113.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 112.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 112.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 112.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 112.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 111.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 111.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 111.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 111.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 111.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 110.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 110.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 109.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 109.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 108.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 108.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 107.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 107.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 106.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 106.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 106.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 106.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 105.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 105.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 105.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 104.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 104.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 104.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 104.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 103.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 103.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 102.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 102.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 102.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 100.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 100.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 99.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 99.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 98.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 97.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 97.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 97.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 96.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 96.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 95.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 94.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 92.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 92.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 92.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 91.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 88.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 86.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 85.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 84.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 79.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 73.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 73.2
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 74.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 74.0
FF:10164-103B2 76 years, female 74.0

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 84.1
Pig sample Sample description nTPM
Caudate
nTPM: 84.1
Samples: 4

Max nTPM: 104.1
Min nTPM: 68.8
Sample A Female 71.1
Sample B Female 92.3
Sample C Male 104.1
Sample D Male 68.8

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