COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:61.2 nTPM
HPA:12.6 nTPM
GTEx:61.2 nTPM
FANTOM5:105.4 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 12.6
overview
Male, age 54 		Colon sample 67
nTPM: 10.8
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 10.1
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 4.1
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 16.8
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 10.3
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 33.1
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 5.4
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 9
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 20
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 8.7
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 10
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 14.6
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 11.4
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 61.2
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 61.2
Samples: 373

Max nTPM: 150.7
Min nTPM: 9.7
Std nTPM: 21.7
Median nTPM: 59.8
GTEX-139UW-2326-SM-5KM1Y 60-69 years, male 150.7
GTEX-11TUW-2326-SM-5EQMO 60-69 years, male 131.3
GTEX-1N2EF-1726-SM-EXUSI 60-69 years, male 121.3
GTEX-1I1GP-2826-SM-A9SKZ 50-59 years, male 117.8
GTEX-1GN73-2726-SM-9WYUB 60-69 years, male 117.2
GTEX-18D9A-1326-SM-7LT8P 30-39 years, female 117.0
GTEX-13PL7-2426-SM-5J2N3 60-69 years, female 115.3
GTEX-1LB8K-2526-SM-DIPEQ 50-59 years, male 111.7
GTEX-1GL5R-1726-SM-9KNUX 50-59 years, male 110.4
GTEX-1RDX4-1926-SM-E6CJJ 50-59 years, female 110.4
GTEX-13O61-1526-SM-5KM3P 60-69 years, male 109.4
Show allShow less
Colon - Transverse
Average nTPM: 34.7
Samples: 406

Max nTPM: 139.4
Min nTPM: 4.7
Std nTPM: 24.1
Median nTPM: 27.6
GTEX-11GSP-1626-SM-5986N 60-69 years, female 139.4
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 119.1
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 109.9
GTEX-1GN73-2626-SM-9KNUQ 60-69 years, male 108.3
GTEX-Y114-1526-SM-4TT79 50-59 years, female 98.8
GTEX-17F9E-1826-SM-7IGMC 50-59 years, male 98.7
GTEX-17JCI-2626-SM-7EWE6 60-69 years, female 97.2
GTEX-1EH9U-2026-SM-7PBYS 60-69 years, male 97.2
GTEX-13FH7-1526-SM-5J2N6 50-59 years, female 93.8
GTEX-16XZZ-2626-SM-6M47S 60-69 years, male 93.7
GTEX-OXRN-2026-SM-E6CHK 50-59 years, male 89.8
Show allShow less

COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 105.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 105.4
FF:10014-101C5 62,83,84 years, mixed 105.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.