HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:45.2 nTPM
HPA:45.2 nTPM
GTEx:47.0 nTPM
FANTOM5:99.2 Scaled Tags Per Million
Pig:39.0 nTPM
Mouse:175.5 nTPM
Allen mouse:2.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003909Antibody CAB009021
Glial cells Not detectedNot detected
Neuronal cells Not detectedLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 45.2
Sample id Sample description nTPM
Hippocampus
nTPM: 43.1
2621 Female, age 67, right hemisphere 45.3
1898 Male, age 80, left hemisphere 44.5
1855 Male, age 76, left hemisphere 44.2
2148 Female, age 91, left hemisphere 42.5
1911 Female, age 85, right hemisphere 42.1
2529 Female, age 94, left hemisphere 40.0
Dentate gyrus
nTPM: 43.4
2531 Female, age 67, both hemispheres 45.2
1927 Female, age 91, both hemispheres 44.1
2010 Male, age 76, both hemispheres 43.5
2246 Female, age 85, both hemispheres 43.1
2528 Male, age 74, both hemispheres 42.2
2530 Female, age 94, left hemisphere 42.2
Entorhinal gyrus
nTPM: 42.2
1938 Female, age 85, left hemisphere 44.8
2764 Male, age 80, right hemisphere 43.5
1787 Male, age 76, left hemisphere 42.0
2613 Female, age 94, left hemisphere 41.4
2117 Female, age 91, right hemisphere 41.1
2686 Male, age 75, right hemisphere 40.2
Hippocampus, CA1
nTPM: 44.2
2749 Male, age 80, left hemisphere 46.9
1873 Female, age 85, both hemispheres 45.6
2045 Male, age 76, both hemispheres 44.8
2527 Male, age 74, both hemispheres 42.3
2082 Female, age 91, right hemisphere 41.3
Hippocampus, CA2
nTPM: 42.3
1892 Male, age 76, both hemispheres 45.6
1963 Male, age 80, left hemisphere 44.0
2113 Female, age 91, right hemisphere 41.3
2249 Male, age 74, both hemispheres 41.2
1940 Female, age 85, left hemisphere 41.0
2437 Female, age 94, left hemisphere 40.8
Hippocampus, CA3
nTPM: 45.2
2620 Female, age 94, left hemisphere 47.7
2137 Male, age 80, left hemisphere 46.9
2861 Female, age 67, both hemispheres 46.6
1867 Male, age 76, both hemispheres 46.3
1891 Female, age 85, both hemispheres 42.6
2436 Male, age 74, both hemispheres 40.9
Parahippocampal cortex
nTPM: 42.1
1850 Male, age 80, both hemispheres 44.0
2018 Male, age 76, both hemispheres 43.5
1933 Female, age 85, both hemispheres 42.2
2532 Female, age 72, left hemisphere 42.2
2245 Female, age 91, both hemispheres 42.1
2693 Female, age 94, both hemispheres 41.8
2622 Female, age 67, right hemisphere 41.7
1990 Female, age 91, right hemisphere 41.6
2250 Female, age 67, right hemisphere 41.2
2692 Male, age 74, both hemispheres 40.6
Perirhinal gyrus
nTPM: 45.0
1841 Female, age 85, right hemisphere 47.8
1847 Female, age 91, left hemisphere 46.7
1794 Male, age 80, right hemisphere 45.3
2848 Male, age 76, right hemisphere 43.3
2521 Female, age 94, right hemisphere 42.0
Subiculum
nTPM: 42.1
1977 Female, age 85, both hemispheres 43.0
2438 Female, age 94, left hemisphere 43.0
1901 Male, age 80, both hemispheres 42.3
2042 Male, age 76, both hemispheres 42.0
2729 Female, age 91, right hemisphere 41.3
2619 Male, age 74, both hemispheres 41.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 47.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 47.0
Samples: 197

Max nTPM: 73.5
Min nTPM: 30.5
Std nTPM: 8.0
Median nTPM: 46.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 73.5
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 65.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 64.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 64.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 63.8
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 63.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 63.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 63.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 62.7
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 60.7
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 60.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 99.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 99.2
FF:10169-103B7 60 years, female 117.1
FF:10153-102I9 76 years, female 81.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 39.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 39.0
Samples: 4

Max nTPM: 46.9
Min nTPM: 33.6
Sample A Female 46.9
Sample B Female 41.4
Sample C Male 34.0
Sample D Male 33.6
Entorhinal cortex
nTPM: 32.9
Samples: 4

Max nTPM: 36.4
Min nTPM: 28.2
Sample A Female 36.4
Sample B Female 34.4
Sample C Male 32.6
Sample D Male 28.2
Subiculum
nTPM: 35.1
Samples: 4

Max nTPM: 47.5
Min nTPM: 29.2
Sample A Female 47.5
Sample B Female 30.7
Sample C Male 33.0
Sample D Male 29.2
Ventral hippocampus
nTPM: 37.3
Samples: 4

Max nTPM: 43.7
Min nTPM: 29.6
Sample A Female 35.0
Sample B Female 29.6
Sample C Male 43.7
Sample D Male 40.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 175.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 169.0
Samples: 4

Max nTPM: 179.4
Min nTPM: 156.0
Sample A Male 156.0
Sample B Male 173.3
Sample C Female 167.2
Sample D Female 179.4
Hippocampal formation
nTPM: 175.5
Samples: 4

Max nTPM: 195.0
Min nTPM: 163.6
Sample A Male 195.0
Sample B Male 169.9
Sample C Female 163.6
Sample D Female 173.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.7
45666 Antisense, RP_040324_01_H03, Mouse strain C57BL/6J (56 days, male) 2.7
67936385 Antisense, RP_040324_01_H03, Mouse strain C57BL/6J (56 days, male) 0.4

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