HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:18.4 nTPM
HPA:18.4 nTPM
GTEx:13.8 nTPM
FANTOM5:24.4 Scaled Tags Per Million
Pig:21.5 nTPM
Mouse:24.5 nTPM
Allen mouse:2.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 18.4
Sample id Sample description nTPM
Hippocampus
nTPM: 17.2
1898 Male, age 80, left hemisphere 20.7
2148 Female, age 91, left hemisphere 18.1
1855 Male, age 76, left hemisphere 17.5
2529 Female, age 94, left hemisphere 16.9
2621 Female, age 67, right hemisphere 16.6
1911 Female, age 85, right hemisphere 13.5
Dentate gyrus
nTPM: 18.4
1927 Female, age 91, both hemispheres 22.1
2528 Male, age 74, both hemispheres 20.2
2531 Female, age 67, both hemispheres 17.9
2010 Male, age 76, both hemispheres 17.6
2246 Female, age 85, both hemispheres 16.7
2530 Female, age 94, left hemisphere 15.7
Entorhinal gyrus
nTPM: 15.9
2764 Male, age 80, right hemisphere 18.2
1787 Male, age 76, left hemisphere 16.1
1938 Female, age 85, left hemisphere 16.1
2117 Female, age 91, right hemisphere 15.6
2613 Female, age 94, left hemisphere 15.4
2686 Male, age 75, right hemisphere 13.7
Hippocampus, CA1
nTPM: 17.0
2749 Male, age 80, left hemisphere 21.7
1873 Female, age 85, both hemispheres 18.0
2045 Male, age 76, both hemispheres 16.4
2527 Male, age 74, both hemispheres 16.2
2082 Female, age 91, right hemisphere 12.8
Hippocampus, CA2
nTPM: 16.9
1963 Male, age 80, left hemisphere 22.7
1892 Male, age 76, both hemispheres 18.6
2437 Female, age 94, left hemisphere 16.1
2249 Male, age 74, both hemispheres 15.9
1940 Female, age 85, left hemisphere 14.2
2113 Female, age 91, right hemisphere 13.9
Hippocampus, CA3
nTPM: 16.8
2620 Female, age 94, left hemisphere 19.8
2436 Male, age 74, both hemispheres 19.1
2861 Female, age 67, both hemispheres 17.8
2137 Male, age 80, left hemisphere 15.6
1867 Male, age 76, both hemispheres 14.4
1891 Female, age 85, both hemispheres 14.4
Parahippocampal cortex
nTPM: 16.7
2245 Female, age 91, both hemispheres 18.1
1990 Female, age 91, right hemisphere 18.0
2250 Female, age 67, right hemisphere 18.0
2692 Male, age 74, both hemispheres 17.7
1850 Male, age 80, both hemispheres 17.1
2622 Female, age 67, right hemisphere 16.7
2532 Female, age 72, left hemisphere 16.6
1933 Female, age 85, both hemispheres 16.5
2693 Female, age 94, both hemispheres 15.1
2018 Male, age 76, both hemispheres 13.5
Perirhinal gyrus
nTPM: 18.0
1847 Female, age 91, left hemisphere 21.8
1794 Male, age 80, right hemisphere 19.5
2521 Female, age 94, right hemisphere 17.4
1841 Female, age 85, right hemisphere 16.1
2848 Male, age 76, right hemisphere 15.3
Subiculum
nTPM: 14.7
2729 Female, age 91, right hemisphere 16.8
1977 Female, age 85, both hemispheres 16.4
2438 Female, age 94, left hemisphere 15.1
2619 Male, age 74, both hemispheres 15.0
1901 Male, age 80, both hemispheres 13.3
2042 Male, age 76, both hemispheres 11.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.8
Samples: 197

Max nTPM: 27.8
Min nTPM: 7.4
Std nTPM: 3.8
Median nTPM: 13.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 27.8
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 26.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 24.7
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 24.5
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 23.6
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 23.4
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 23.3
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 22.3
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 22.0
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 22.0
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 21.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 24.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 24.4
FF:10169-103B7 60 years, female 26.1
FF:10153-102I9 76 years, female 22.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 21.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 19.8
Samples: 4

Max nTPM: 22.9
Min nTPM: 17.0
Sample A Female 22.9
Sample B Female 22.1
Sample C Male 17.2
Sample D Male 17.0
Entorhinal cortex
nTPM: 21.4
Samples: 4

Max nTPM: 23.0
Min nTPM: 19.0
Sample A Female 21.9
Sample B Female 21.6
Sample C Male 23.0
Sample D Male 19.0
Subiculum
nTPM: 21.5
Samples: 4

Max nTPM: 27.1
Min nTPM: 18.0
Sample A Female 27.1
Sample B Female 20.0
Sample C Male 21.0
Sample D Male 18.0
Ventral hippocampus
nTPM: 21.1
Samples: 4

Max nTPM: 26.1
Min nTPM: 17.1
Sample A Female 19.8
Sample B Female 17.1
Sample C Male 26.1
Sample D Male 21.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 24.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 24.5
Samples: 4

Max nTPM: 27.1
Min nTPM: 22.2
Sample A Male 22.2
Sample B Male 24.3
Sample C Female 24.5
Sample D Female 27.1
Hippocampal formation
nTPM: 22.3
Samples: 4

Max nTPM: 23.4
Min nTPM: 20.9
Sample A Male 23.4
Sample B Male 22.0
Sample C Female 22.7
Sample D Female 20.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.1
70431265 Antisense, RP_050614_02_E04, Mouse strain C57BL/6J (56 days, male) 4.0
73870515 Antisense, RP_051212_04_B09, Mouse strain C57BL/6J (56 days, male) 0.1

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