COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Low
Glandular cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:37.5 nTPM
HPA:29.4 nTPM
GTEx:37.5 nTPM
FANTOM5:33.0 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA001330
Endothelial cells Low
Glandular cells High

COLON - HPA RNA-seqi
Average nTPM 29.4
overview
Male, age 54 		Colon sample 67
nTPM: 23.8
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 24.4
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 24.4
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 29
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 27.9
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 34.5
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 31.5
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 29.1
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 32.7
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 35.3
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 25.9
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 30.1
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 33.5
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 37.5
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 37.5
Samples: 373

Max nTPM: 58.4
Min nTPM: 24.7
Std nTPM: 5.7
Median nTPM: 37.0
GTEX-ZYFD-2226-SM-5E43P 50-59 years, male 58.4
GTEX-15RJ7-1726-SM-6PAL3 40-49 years, male 57.7
GTEX-1LKK1-2426-SM-DIPES 50-59 years, female 53.1
GTEX-1N2EF-1726-SM-EXUSI 60-69 years, male 53.0
GTEX-1LVAO-2826-SM-E9TJH 60-69 years, male 52.6
GTEX-1JJE9-2526-SM-ARU8K 70-79 years, male 52.3
GTEX-1A3MX-2326-SM-718B4 60-69 years, male 50.6
GTEX-WI4N-2226-SM-4OOS9 40-49 years, female 49.7
GTEX-15ER7-2826-SM-6PAN2 20-29 years, female 48.9
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 48.8
GTEX-15UF6-2726-SM-7KULY 70-79 years, female 48.4
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Colon - Transverse
Average nTPM: 36.7
Samples: 406

Max nTPM: 53.8
Min nTPM: 21.8
Std nTPM: 5.5
Median nTPM: 36.5
GTEX-1CAMR-0926-SM-7MXTD 20-29 years, male 53.8
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 52.8
GTEX-14XAO-2026-SM-69LOI 60-69 years, female 52.7
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 51.8
GTEX-ZT9W-1826-SM-51MQX 50-59 years, male 50.6
GTEX-WVJS-2426-SM-EZ6LI 50-59 years, male 50.5
GTEX-17HGU-2426-SM-7EWDP 50-59 years, male 49.7
GTEX-1K2DA-2026-SM-CGQGK 50-59 years, male 49.3
GTEX-UJHI-1126-SM-4IHLN 50-59 years, female 48.0
GTEX-1122O-1526-SM-5N9CL 60-69 years, female 47.6
GTEX-1S82U-0726-SM-E9TKI 30-39 years, female 47.4
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 33.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 33.0
FF:10014-101C5 62,83,84 years, mixed 33.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.