HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:19.6 nTPM
HPA:19.6 nTPM
GTEx:17.3 nTPM
FANTOM5:96.9 Scaled Tags Per Million
Pig:68.4 nTPM
Mouse:124.1 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041642Antibody CAB045955
Glial cells HighMedium
Neuronal cells LowLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 19.6
Sample id Sample description nTPM
Hippocampus
nTPM: 19.0
2148 Female, age 91, left hemisphere 29.7
2529 Female, age 94, left hemisphere 22.0
1855 Male, age 76, left hemisphere 17.9
1911 Female, age 85, right hemisphere 16.6
1898 Male, age 80, left hemisphere 14.4
2621 Female, age 67, right hemisphere 13.4
Dentate gyrus
nTPM: 13.4
2246 Female, age 85, both hemispheres 21.7
2528 Male, age 74, both hemispheres 19.9
2530 Female, age 94, left hemisphere 14.6
1927 Female, age 91, both hemispheres 12.6
2010 Male, age 76, both hemispheres 6.4
2531 Female, age 67, both hemispheres 5.6
Entorhinal gyrus
nTPM: 15.0
2117 Female, age 91, right hemisphere 28.4
1938 Female, age 85, left hemisphere 18.0
2686 Male, age 75, right hemisphere 13.2
2764 Male, age 80, right hemisphere 12.4
1787 Male, age 76, left hemisphere 9.3
2613 Female, age 94, left hemisphere 8.9
Hippocampus, CA1
nTPM: 16.5
2527 Male, age 74, both hemispheres 29.9
2082 Female, age 91, right hemisphere 19.4
1873 Female, age 85, both hemispheres 15.6
2749 Male, age 80, left hemisphere 11.5
2045 Male, age 76, both hemispheres 6.3
Hippocampus, CA2
nTPM: 16.9
2113 Female, age 91, right hemisphere 24.2
2249 Male, age 74, both hemispheres 20.1
1940 Female, age 85, left hemisphere 18.6
1963 Male, age 80, left hemisphere 14.7
2437 Female, age 94, left hemisphere 14.6
1892 Male, age 76, both hemispheres 9.0
Hippocampus, CA3
nTPM: 13.9
2436 Male, age 74, both hemispheres 18.4
1891 Female, age 85, both hemispheres 15.2
2137 Male, age 80, left hemisphere 13.9
2861 Female, age 67, both hemispheres 13.2
1867 Male, age 76, both hemispheres 11.5
2620 Female, age 94, left hemisphere 11.0
Parahippocampal cortex
nTPM: 16.7
2692 Male, age 74, both hemispheres 27.7
2622 Female, age 67, right hemisphere 20.7
2245 Female, age 91, both hemispheres 19.2
1933 Female, age 85, both hemispheres 18.6
2250 Female, age 67, right hemisphere 17.4
1990 Female, age 91, right hemisphere 17.1
2532 Female, age 72, left hemisphere 13.5
1850 Male, age 80, both hemispheres 12.2
2018 Male, age 76, both hemispheres 12.2
2693 Female, age 94, both hemispheres 8.7
Perirhinal gyrus
nTPM: 12.4
1847 Female, age 91, left hemisphere 15.9
1794 Male, age 80, right hemisphere 14.9
1841 Female, age 85, right hemisphere 12.1
2521 Female, age 94, right hemisphere 11.7
2848 Male, age 76, right hemisphere 7.5
Subiculum
nTPM: 19.6
2729 Female, age 91, right hemisphere 31.8
2619 Male, age 74, both hemispheres 28.0
1901 Male, age 80, both hemispheres 15.9
2438 Female, age 94, left hemisphere 14.7
2042 Male, age 76, both hemispheres 14.2
1977 Female, age 85, both hemispheres 13.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 17.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.3
Samples: 197

Max nTPM: 56.7
Min nTPM: 1.9
Std nTPM: 9.8
Median nTPM: 14.1
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 56.7
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 49.9
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 49.1
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 48.6
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 44.4
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 41.5
GTEX-1H1CY-0011-R1a-SM-CKZOZ 60-69 years, female 39.3
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 38.4
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 38.2
GTEX-1I1GQ-0011-R1a-SM-CY8GG 50-59 years, male 37.9
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 37.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 96.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 96.9
FF:10169-103B7 60 years, female 99.4
FF:10153-102I9 76 years, female 94.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 68.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 50.9
Samples: 4

Max nTPM: 61.3
Min nTPM: 38.2
Sample A Female 61.3
Sample B Female 38.2
Sample C Male 48.7
Sample D Male 55.3
Entorhinal cortex
nTPM: 68.4
Samples: 4

Max nTPM: 78.0
Min nTPM: 64.1
Sample A Female 64.1
Sample B Female 78.0
Sample C Male 67.3
Sample D Male 64.1
Subiculum
nTPM: 49.7
Samples: 4

Max nTPM: 66.4
Min nTPM: 41.7
Sample A Female 66.4
Sample B Female 43.0
Sample C Male 41.7
Sample D Male 47.5
Ventral hippocampus
nTPM: 47.8
Samples: 4

Max nTPM: 58.1
Min nTPM: 38.8
Sample A Female 40.6
Sample B Female 38.8
Sample C Male 53.8
Sample D Male 58.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 124.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 124.1
Samples: 4

Max nTPM: 133.2
Min nTPM: 112.9
Sample A Male 133.2
Sample B Male 112.9
Sample C Female 132.1
Sample D Female 118.1
Hippocampal formation
nTPM: 111.4
Samples: 4

Max nTPM: 124.6
Min nTPM: 99.7
Sample A Male 121.1
Sample B Male 100.2
Sample C Female 99.7
Sample D Female 124.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
370 Antisense, RP_Baylor_103313, Mouse strain C57BL/6J (56 days, male) 0.3
369 Antisense, RP_Baylor_103313, Mouse strain C57BL/6J (56 days, male) 0.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
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