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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:57.8 nTPM
FANTOM5:161.2 Scaled Tags Per Million
Pig:66.7 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA006880Antibody HPA053715Antibody CAB033274
Glial cells LowNot detectedNot detected
Neuronal cells LowNot detectedNot detected





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 57.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 57.8
Samples: 246

Max nTPM: 265.0
Min nTPM: 11.0
Std nTPM: 22.4
Median nTPM: 55.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 265.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 149.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 123.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 119.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 111.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 106.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 106.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 106.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 94.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 93.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 92.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 92.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 92.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 91.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 90.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 90.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 89.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 85.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 82.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 79.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 78.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 78.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 77.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 76.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 76.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 74.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 74.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 74.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 74.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 73.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 73.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 73.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 73.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 72.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 72.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 72.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 72.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 72.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 71.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 71.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 71.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 71.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 70.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 69.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 69.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 69.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 69.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 69.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 69.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 68.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 68.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 68.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 67.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 67.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 67.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 66.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 66.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 66.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 66.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 65.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 65.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 65.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 65.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 65.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 65.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 64.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 64.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 64.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 64.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 64.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 64.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 63.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 63.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 63.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 63.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 63.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 63.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 62.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 62.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 61.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 61.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 61.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 61.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 61.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 61.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 61.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 60.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 60.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 60.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 60.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 60.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 60.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 59.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 59.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 59.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 59.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 59.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 59.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 58.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 58.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 58.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 58.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 58.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 58.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 57.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 57.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 57.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 57.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 57.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 57.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 57.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 56.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 56.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 56.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 56.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 56.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 56.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 56.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 56.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 55.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 55.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 55.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 55.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 55.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 55.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 55.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 54.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 54.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 54.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 54.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 54.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 54.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 54.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 54.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 53.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 53.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 53.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 53.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 53.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 53.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 53.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 52.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 52.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 52.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 52.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 52.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 52.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 51.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 51.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 51.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 51.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 51.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 51.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 50.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 50.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 50.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 50.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 50.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 50.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 50.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 49.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 49.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 49.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 49.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 49.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 49.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 49.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 48.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 48.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 48.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 48.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 48.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 48.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 48.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 47.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 47.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 47.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 47.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 47.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 47.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 47.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 46.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 46.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 46.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 46.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 46.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 46.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 46.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 45.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 45.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 45.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 45.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 45.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 44.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 43.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 43.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 42.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 42.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 42.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 42.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 41.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 41.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 40.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 40.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 40.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 40.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 40.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 40.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 39.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 39.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 39.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 39.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 39.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 39.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 38.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 38.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 38.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 38.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 38.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 38.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 38.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 36.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 36.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 36.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 36.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 36.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 35.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 34.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 34.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 34.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 33.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 32.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 32.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 31.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 30.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 30.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 30.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 29.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 28.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 28.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 27.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 26.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 24.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 20.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 17.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 11.0
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 161.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 161.2
FF:10164-103B2 76 years, female 161.2

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 66.7
Pig sample Sample description nTPM
Caudate
nTPM: 66.8
Samples: 4

Max nTPM: 81.7
Min nTPM: 57.4
Sample A Female 60.7
Sample B Female 57.4
Sample C Male 81.7
Sample D Male 67.2

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