HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:17.0 nTPM
HPA:17.0 nTPM
GTEx:18.5 nTPM
FANTOM5:79.3 Scaled Tags Per Million
Pig:23.2 nTPM
Mouse:2.4 nTPM
Allen mouse:3.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039928
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.0
Sample id Sample description nTPM
Hippocampus
nTPM: 12.9
1898 Male, age 80, left hemisphere 15.7
1855 Male, age 76, left hemisphere 14.4
2621 Female, age 67, right hemisphere 13.6
1911 Female, age 85, right hemisphere 11.6
2148 Female, age 91, left hemisphere 11.3
2529 Female, age 94, left hemisphere 10.7
Dentate gyrus
nTPM: 14.2
2010 Male, age 76, both hemispheres 16.9
1927 Female, age 91, both hemispheres 16.6
2246 Female, age 85, both hemispheres 13.5
2528 Male, age 74, both hemispheres 13.4
2531 Female, age 67, both hemispheres 12.6
2530 Female, age 94, left hemisphere 11.9
Entorhinal gyrus
nTPM: 13.2
1938 Female, age 85, left hemisphere 14.6
2613 Female, age 94, left hemisphere 14.4
2686 Male, age 75, right hemisphere 13.0
1787 Male, age 76, left hemisphere 12.9
2764 Male, age 80, right hemisphere 12.3
2117 Female, age 91, right hemisphere 12.0
Hippocampus, CA1
nTPM: 15.9
2749 Male, age 80, left hemisphere 20.9
1873 Female, age 85, both hemispheres 16.0
2045 Male, age 76, both hemispheres 15.8
2527 Male, age 74, both hemispheres 14.2
2082 Female, age 91, right hemisphere 12.5
Hippocampus, CA2
nTPM: 14.4
1892 Male, age 76, both hemispheres 18.7
1963 Male, age 80, left hemisphere 16.8
2249 Male, age 74, both hemispheres 13.8
1940 Female, age 85, left hemisphere 13.0
2113 Female, age 91, right hemisphere 12.9
2437 Female, age 94, left hemisphere 11.4
Hippocampus, CA3
nTPM: 14.5
2137 Male, age 80, left hemisphere 20.7
1867 Male, age 76, both hemispheres 17.7
1891 Female, age 85, both hemispheres 13.5
2620 Female, age 94, left hemisphere 12.5
2436 Male, age 74, both hemispheres 11.2
2861 Female, age 67, both hemispheres 11.2
Parahippocampal cortex
nTPM: 15.1
1850 Male, age 80, both hemispheres 16.7
2693 Female, age 94, both hemispheres 16.7
2250 Female, age 67, right hemisphere 16.6
1933 Female, age 85, both hemispheres 15.3
2532 Female, age 72, left hemisphere 15.1
2018 Male, age 76, both hemispheres 14.6
2245 Female, age 91, both hemispheres 14.6
2692 Male, age 74, both hemispheres 14.6
2622 Female, age 67, right hemisphere 13.3
1990 Female, age 91, right hemisphere 13.2
Perirhinal gyrus
nTPM: 17.0
1794 Male, age 80, right hemisphere 19.8
1841 Female, age 85, right hemisphere 19.1
2848 Male, age 76, right hemisphere 16.8
2521 Female, age 94, right hemisphere 15.0
1847 Female, age 91, left hemisphere 14.3
Subiculum
nTPM: 13.4
2438 Female, age 94, left hemisphere 14.2
1901 Male, age 80, both hemispheres 13.9
2042 Male, age 76, both hemispheres 13.9
1977 Female, age 85, both hemispheres 13.0
2729 Female, age 91, right hemisphere 12.9
2619 Male, age 74, both hemispheres 12.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 18.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 18.5
Samples: 197

Max nTPM: 36.2
Min nTPM: 10.1
Std nTPM: 4.4
Median nTPM: 17.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 36.2
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 30.5
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 30.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 29.5
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 29.5
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 29.1
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 28.5
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 28.2
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 27.8
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 27.2
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 26.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 79.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 79.3
FF:10169-103B7 60 years, female 103.5
FF:10153-102I9 76 years, female 55.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 23.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 22.8
Samples: 4

Max nTPM: 25.6
Min nTPM: 18.9
Sample A Female 25.6
Sample B Female 22.5
Sample C Male 24.3
Sample D Male 18.9
Entorhinal cortex
nTPM: 23.0
Samples: 4

Max nTPM: 26.0
Min nTPM: 19.6
Sample A Female 22.3
Sample B Female 26.0
Sample C Male 23.9
Sample D Male 19.6
Subiculum
nTPM: 23.3
Samples: 4

Max nTPM: 28.7
Min nTPM: 20.9
Sample A Female 28.7
Sample B Female 21.6
Sample C Male 21.8
Sample D Male 20.9
Ventral hippocampus
nTPM: 21.0
Samples: 4

Max nTPM: 22.6
Min nTPM: 20.3
Sample A Female 22.6
Sample B Female 20.5
Sample C Male 20.3
Sample D Male 20.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 2.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 2.4
Samples: 4

Max nTPM: 2.7
Min nTPM: 2.0
Sample A Male 2.4
Sample B Male 2.0
Sample C Female 2.5
Sample D Female 2.7
Hippocampal formation
nTPM: 2.0
Samples: 4

Max nTPM: 2.6
Min nTPM: 1.0
Sample A Male 2.3
Sample B Male 1.9
Sample C Female 2.6
Sample D Female 1.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.0
69169457 Antisense, RP_050321_03_F02, Mouse strain C57BL/6J (56 days, male) 3.0

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