HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:8.0 nTPM
HPA:8.0 nTPM
GTEx:7.6 nTPM
FANTOM5:39.9 Scaled Tags Per Million
Pig:22.2 nTPM
Mouse:44.7 nTPM
Allen mouse:2.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA023331
Glial cells Not detected
Neuronal cells Low


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 8.0
Sample id Sample description nTPM
Hippocampus
nTPM: 7.5
2529 Female, age 94, left hemisphere 12.5
2621 Female, age 67, right hemisphere 9.5
2148 Female, age 91, left hemisphere 7.3
1855 Male, age 76, left hemisphere 6.3
1911 Female, age 85, right hemisphere 5.3
1898 Male, age 80, left hemisphere 4.3
Dentate gyrus
nTPM: 5.0
2010 Male, age 76, both hemispheres 8.0
2530 Female, age 94, left hemisphere 7.5
1927 Female, age 91, both hemispheres 5.2
2246 Female, age 85, both hemispheres 4.6
2528 Male, age 74, both hemispheres 4.6
2531 Female, age 67, both hemispheres 0.0
Entorhinal gyrus
nTPM: 5.8
2117 Female, age 91, right hemisphere 13.9
1787 Male, age 76, left hemisphere 8.7
1938 Female, age 85, left hemisphere 6.3
2686 Male, age 75, right hemisphere 3.4
2764 Male, age 80, right hemisphere 2.5
2613 Female, age 94, left hemisphere 0.0
Hippocampus, CA1
nTPM: 5.7
2527 Male, age 74, both hemispheres 10.0
2082 Female, age 91, right hemisphere 8.4
1873 Female, age 85, both hemispheres 5.2
2045 Male, age 76, both hemispheres 4.0
2749 Male, age 80, left hemisphere 0.9
Hippocampus, CA2
nTPM: 7.6
2249 Male, age 74, both hemispheres 12.4
2113 Female, age 91, right hemisphere 9.4
2437 Female, age 94, left hemisphere 7.9
1963 Male, age 80, left hemisphere 6.3
1940 Female, age 85, left hemisphere 6.2
1892 Male, age 76, both hemispheres 3.3
Hippocampus, CA3
nTPM: 5.2
2436 Male, age 74, both hemispheres 10.9
1891 Female, age 85, both hemispheres 7.1
2620 Female, age 94, left hemisphere 6.5
2861 Female, age 67, both hemispheres 3.1
1867 Male, age 76, both hemispheres 2.4
2137 Male, age 80, left hemisphere 1.4
Parahippocampal cortex
nTPM: 7.3
2693 Female, age 94, both hemispheres 10.7
1850 Male, age 80, both hemispheres 9.3
2250 Female, age 67, right hemisphere 7.9
2532 Female, age 72, left hemisphere 7.8
2692 Male, age 74, both hemispheres 7.4
2018 Male, age 76, both hemispheres 6.7
1933 Female, age 85, both hemispheres 6.0
2245 Female, age 91, both hemispheres 5.7
2622 Female, age 67, right hemisphere 5.6
1990 Female, age 91, right hemisphere 5.4
Perirhinal gyrus
nTPM: 8.0
1841 Female, age 85, right hemisphere 10.0
2848 Male, age 76, right hemisphere 9.5
1847 Female, age 91, left hemisphere 8.4
1794 Male, age 80, right hemisphere 6.1
2521 Female, age 94, right hemisphere 5.9
Subiculum
nTPM: 7.1
2729 Female, age 91, right hemisphere 10.8
2042 Male, age 76, both hemispheres 10.0
2619 Male, age 74, both hemispheres 7.5
2438 Female, age 94, left hemisphere 6.4
1977 Female, age 85, both hemispheres 5.3
1901 Male, age 80, both hemispheres 2.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 7.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 7.6
Samples: 197

Max nTPM: 19.2
Min nTPM: 2.6
Std nTPM: 2.7
Median nTPM: 7.2
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 19.2
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 18.6
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 17.4
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 15.9
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 15.4
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 14.1
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 13.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 12.5
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 12.3
GTEX-1H1CY-0011-R1a-SM-CKZOZ 60-69 years, female 11.9
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 11.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 39.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 39.9
FF:10153-102I9 76 years, female 49.5
FF:10169-103B7 60 years, female 30.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 22.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 22.2
Samples: 4

Max nTPM: 28.3
Min nTPM: 12.4
Sample A Female 26.7
Sample B Female 21.4
Sample C Male 28.3
Sample D Male 12.4
Entorhinal cortex
nTPM: 18.7
Samples: 4

Max nTPM: 23.2
Min nTPM: 13.4
Sample A Female 20.7
Sample B Female 23.2
Sample C Male 17.3
Sample D Male 13.4
Subiculum
nTPM: 15.4
Samples: 4

Max nTPM: 16.9
Min nTPM: 13.9
Sample A Female 16.9
Sample B Female 13.9
Sample C Male 15.1
Sample D Male 15.8
Ventral hippocampus
nTPM: 17.2
Samples: 4

Max nTPM: 24.7
Min nTPM: 13.2
Sample A Female 17.2
Sample B Female 13.2
Sample C Male 13.7
Sample D Male 24.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 44.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 44.7
Samples: 4

Max nTPM: 47.0
Min nTPM: 40.7
Sample A Male 45.6
Sample B Male 47.0
Sample C Female 40.7
Sample D Female 45.6
Hippocampal formation
nTPM: 41.0
Samples: 4

Max nTPM: 45.9
Min nTPM: 34.3
Sample A Male 42.1
Sample B Male 45.9
Sample C Female 41.8
Sample D Female 34.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.8
70598366 Antisense, RP_050407_04_F09, Mouse strain C57BL/6J (56 days, male) 2.9
72128751 Antisense, RP_051017_04_C07, Mouse strain C57BL/6J (56 days, male) 2.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
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