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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody HPA042257
Photoreceptor cells
Medium
Limiting membrane
Not detected
Outer plexiform layer
High
Inner nuclear layer
Not detected
Inner plexiform layer
Not detected
Ganglion cells
Not detected
Nerve fiber layer
Not detected
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM: 529.1
Min nTPM: 112.7
Std nTPM: 73.9
Median nTPM: 0.0
490_1
67 years, female
529.1
466_1
57 years, female
463.8
415_1
77 years, female
449.6
149_1
88 years, male
419.3
32_1
67 years, male
383.6
162_1
79 years, female
366.6
43_1
64 years, female
363.7
81_1
67 years, male
358.2
468_1
89 years, male
344.4
217_1
76 years, male
335.5
491_1
89 years, female
328.3
495_1
57 years, female
326.9
414_1
84 years, female
324.0
518_1
75 years, female
308.1
246_1
77 years, male
300.5
126_1
63 years, male
295.9
117_1
61 years, male
294.8
307_1
66 years, female
294.2
413_1
59 years, female
292.8
265_1
87 years, male
289.5
6_1
73 years, female
288.7
526_1
61 years, male
282.6
324_1
76 years, male
279.4
405_1
91 years, male
279.1
389_1
86 years, female
278.5
35_1
74 years, female
277.8
142_1
61 years, female
276.3
9_1
66 years, female
275.2
229_1
69 years, female
270.0
153_1
70 years, female
268.2
499_1
55 years, female
268.1
347_1
72 years, male
262.2
251_1
78 years, male
254.3
335_1
73 years, female
251.2
254_1
77 years, female
250.8
355_1
70 years, female
250.7
137_1
83 years, male
248.9
311_1
78 years, male
245.1
375_1
74 years, female
245.0
145_1
84 years, male
243.8
172_1
72 years, female
243.3
396_1
62 years, male
243.2
115_1
83 years, male
242.7
189_1
76 years, male
240.7
313_1
79 years, female
237.9
425_1
59 years, female
236.0
42_1
85 years, male
233.8
517_1
88 years, male
233.8
288_1
66 years, female
230.3
99_1
64 years, male
226.6
480_1
63 years, male
223.8
18_1
88 years, male
223.6
237_1
82 years, male
221.1
291_1
76 years, male
220.6
447_1
81 years, male
218.3
316_1
62 years, male
217.3
352_1
62 years, male
216.4
109_1
81 years, female
216.2
354_1
81 years, female
213.4
318_1
68 years, male
212.4
348_1
84 years, male
208.1
308_1
70 years, female
207.0
119_1
70 years, female
205.7
501_1
88 years, male
203.3
320_1
89 years, female
202.5
286_1
68 years, female
202.4
386_1
76 years, male
201.9
89_1
63 years, male
198.2
376_1
75 years, female
198.0
17_1
71 years, male
197.8
406_1
79 years, male
196.5
120_1
70 years, female
196.2
349_1
83 years, male
194.8
350_1
84 years, female
192.7
319_1
81 years, male
192.5
394_1
75 years, female
188.6
292_1
71 years, male
187.8
315_1
62 years, female
187.4
379_1
60 years, male
186.3
218_1
71 years, female
182.5
377_1
82 years, female
181.2
243_1
75 years, male
178.8
139_1
64 years, female
178.2
314_1
67 years, male
177.6
321_1
62 years, female
177.3
266_1
85 years, male
176.8
404_1
82 years, female
176.8
503_1
68 years, male
176.1
322_1
76 years, male
174.3
293_1
68 years, female
169.7
353_1
82 years, female
168.9
4_1
88 years, female
166.6
264_1
73 years, female
166.3
163_1
78 years, male
161.5
384_1
83 years, male
159.0
2_1
77 years, female
156.1
356_1
87 years, female
155.4
351_1
91 years, male
153.7
177_1
74 years, male
153.3
41_1
94 years, female
148.7
173_1
67 years, male
133.6
506_1
65 years, male
127.5
317_1
60 years, male
127.2
295_1
61 years, female
115.5
452_1
88 years, female
112.7
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.